Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral33g00004 ATGGACAGAGTGGTTTCGTCTTTTATGGCTGCTTTACTCCTTTGTGCAATCCTAGTGTTTGATTTGGTGCTAAATGTTTCTGGCAATGCCGAAGGTGATGCCCTGAATGCATTTAAGACCAGCGTAGCTGATCCAAACAATGTTCTTCAAAGCTGGGATGCCACGCTTGTCAATCCTTGCACGTGGTTTCACGTTACATGCAATACTGATAATAGTGTGACCCGTGTTGATCTTGAAAATGCCAACCTTTCGGGTCCACTAGTTGCACAGCTCGGTCAACTCCCAAATTTGCAGTACTTGGAGCTTTATACTAATAATATAACAGGAAAAATCCCAGCTGAATTTGGAAATCTGACAAATTTGGTGAGCTTGGATCTATTCGCCAATCACATATCTGGTAGCATCCCAGGAACATTGGGCAATCTGAAAAAACTACGTTTCCTGCGTCTCAACAATAACACCTTGAGTGGAGACATTCCCATGGCGTTGACTACTGTTAATTCACTGCAAGTCCTTGATCTTTCAAAAAACAAGCTAAAAGGAGAAATCCCAACCAATGGTTCATTTCTATCGTTCACTCAACTCAGTTTTAATGATAATCCTGATTTGAAACCACTAAACGTTACACCTGGGCCAATTTCACCAACGCCGCCACCATCTCCTTCAGGCAATAGTGCTACTAGAACTATTGTTGGAGTTGCAGCTGCTCTAATATTTGCAGCCCTTGCAATTGCACTTGCTTATTACTGGAAGAGGAGACCGCAATATTATTTCTTTAATGTTCCTGCTGAGGAGGACCCTAAAGTTCACCTTGGTCAGCTTAAGAAGTTTCCCCTGAGTGAGCTCGAAGCTGCAACAGACAACTTTAGTAACAAGAACATTCTAGGTAGAGGTGGATTTGGTAAGGTTTACAAAGGAAGGTTAGCTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGAACTCAGGGTGGAGAGTTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCACCGCAATTTGCTGCGGCTGCGTGGTTTTTGCATGACACCAGCTGAACGGTTGCTTGTGTATCCTTTCATGGCCAATGGTAGTGTGGCATCATGTTTACGAGACCGCCCGGAATCAAAACCCCCACTTGAATGGCCCGTAAGGAAGCAAATTGTACTAGGAGCTGCTAGAGGGCTTGCTTATCTGCATGATCATTGTGATCTAAAGATCATTCACCAGAATGTTAAAGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTTGTTGGGGACTTTGGTTTGGCAAAACTCATGAATTACAAAGATACTCATGTTACCACTGCTGTGCGCGGTACCATTGGGCACATCGCGCCGGAATACCTCTCCACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGTTATGGCGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCCTTCGATCTTGCACGACTTGCCAATGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAAACTGGAAGCACTAGTGGATGCTGATCTGGGGGGTGATTATAATGAAGAGGCGGCGGAGCATCTGATCCAGTTGGCATTGCTTTGCACACAAAGCTCGGCTAAGGAAAGACCAAAGATGTCTGAGGTGGTAAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAATGGGAACAATGGCAGAAAGACGAGATGCATCGACGAGATAATCAAACCCTTCTCCTCAATTCTAGTTGGCCAATCGTGGACTCAGCTTCACATATCCCCCCAGATGAACTCTCAGGTCCCAGATGA 1839 0.4426 MDRVVSSFMAALLLCAILVFDLVLNVSGNAEGDALNAFKTSVADPNNVLQSWDATLVNPCTWFHVTCNTDNSVTRVDLENANLSGPLVAQLGQLPNLQYLELYTNNITGKIPAEFGNLTNLVSLDLFANHISGSIPGTLGNLKKLRFLRLNNNTLSGDIPMALTTVNSLQVLDLSKNKLKGEIPTNGSFLSFTQLSFNDNPDLKPLNVTPGPISPTPPPSPSGNSATRTIVGVAAALIFAALAIALAYYWKRRPQYYFFNVPAEEDPKVHLGQLKKFPLSELEAATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPAERLLVYPFMANGSVASCLRDRPESKPPLEWPVRKQIVLGAARGLAYLHDHCDLKIIHQNVKAANILLDEEYEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLEALVDADLGGDYNEEAAEHLIQLALLCTQSSAKERPKMSEVVRMLEGDGLAEKWEQWQKDEMHRRDNQTLLLNSSWPIVDSASHIPPDELSGPR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral33g00004 612 Gene3D Ribonuclease Inhibitor 28 209 IPR032675 -
Pral33g00004 612 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pral33g00004 612 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 574 - -
Pral33g00004 612 SUPERFAMILY Protein kinase-like (PK-like) 268 564 IPR011009 -
Pral33g00004 612 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Pral33g00004 612 FunFam Somatic embryogenesis receptor-like kinase 1 366 583 - -
Pral33g00004 612 Pfam Protein kinase domain 290 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral33g00004 612 SUPERFAMILY L domain-like 31 220 - -
Pral33g00004 612 FunFam Somatic embryogenesis receptor kinase 1 258 365 - -
Pral33g00004 612 Gene3D Transferase(Phosphotransferase) domain 1 366 583 - -
Pral33g00004 612 Gene3D Phosphorylase Kinase; domain 1 258 365 - -
Pral33g00004 612 ProSiteProfiles Protein kinase domain profile. 289 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral33g00004 612 Pfam Leucine rich repeat 73 131 IPR001611 GO:0005515
Pral33g00004 612 FunFam Somatic embryogenesis receptor kinase 1 27 215 - -
Pral33g00004 612 SMART serkin_6 289 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral33g00004 Pral-Chr33 43945 51621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral33g00004 8 612 Receptor kinase-like Gene Family AT4G33430 69.909 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral33g00004 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral33g00004 K13416 - gmx:100800522 921.383