Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral33g00003 ATGAAGAGGATGAGACATATGGACAGAATGGTTCCGTCTTTCATGGCCGCTTTACTCCTTTGTGCGGTCTTAGTGCTTGATTTGGTGCTAAATGTTTCTGGCAATGCCGAAGGTGATGCCCTGAATACATTTAAGACCAGCGTAGTTGATCCAAACAATGTTCTTCAAAGCTGGGATGCCACCCTTGTCAATCCTTGCACGTGGTTTCACGTTACATGCAATAGTGAGAACAGCGTGACCCGTGTTGATCTTGGAAATGCCAACCTTTCGGGTCCACTAGTTGCACAGCTTGGTCAACTCCCGAATTTGCAGTACTTGGAGCTTTATACTAATAACATAACAGGAAAAATCCCAGCTGAATTTGGAAATCTGACAAATTTGGTGAGCTTGGATCTGTACGCCAATCACATATCTGGTAGCATCCCAGAAACATTGGGCAATCTTAAAAAGCTACGTTTCCTGCGTCTCAACAATAACACCTTGAGTGGAGACATTCCCATGGCGTTGACTACTGTTAATTCACTGCAAGTCCTTGATCTTTCAAAAAACAAGCTAAAAGGAGTAATCCCAGTCAATGGTTCATTTCTAGCGTTCACTCAACTCAGTTTTAATGATAATCCTGATTTGAAACCACTAGACGTTACACCTGGCCCAATTTCACCAACGCCGCCGCCATCTCCTTCAGGCAATAGTCGTACTGGAACTATTGCTGGAGGAGTTGCTGCTGCCGCTGCTCTAATATTTGCAGCCCCTGCAATTGCACTTGCTTATTGCCGGAAGAGGAGACCACAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAGAAGTTTCCCCTGCGTGAGCTCCAAGTTGCAACAGACAACTTTAGTAACAAGAACATTCTGGGTAGAGGTGGATTTGGTAAGGTTTACAGAGGAAGGCTAGCTGATGGGTCTCTGGTTGCAGTGAAAAGACTTAAAGAGGAACGAACTCAGGGTGGAGAGCTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCACCGTAATTTGCTACGGCTGCGTGGTTTTTGCATGACACCAACTGAAAGGTTGCTTGTGTATCCTTTCATGGCTAATGGTAGTGTGGCATCATGTTTACGAGACCGCCCGGAATCAAAACCCCCGCTTGAATGGCCTGTAAGGAAGCGAATTGCACTGGGAGCTGCTAGAGGGCTTGCTTATTTGCATGATCATTGTGATCCAAAGATCATTCACCGTGATGTTAAAGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTTGTTGGGGACTTTGGTTTGGCAAAACTCATGAATTACAAAGATACTCATGTTACCACTGCTGTGCGCGGTACCATTGGGCACATCGCGCCGGAATACCTCTCCACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGTTATGGCGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCCTTCGATCTTGCACGACTTGCCAATGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAAACTGGAAGCACTAGTGGATGCTGATCTGGGTGGTGACTATAATGAAGAGGAGGCGGAGCATCTGATCCAGTTGGCATTGCTTTGCACACAAAGCTCGGCTATGGAAAGACCAAAGATGTCTGAGGTGGTAAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAATGGGAACAATGGCAGAAAGACGAGATGCATCGGCGAGATAATCAAACCCTTCTCCCCAATTCTAGTTGGCCAATTGTGGACTCAGCTTCACATATTCCCCCAGATGAACTCTCAGGTCCCAGATGA 1866 0.4544 MKRMRHMDRMVPSFMAALLLCAVLVLDLVLNVSGNAEGDALNTFKTSVVDPNNVLQSWDATLVNPCTWFHVTCNSENSVTRVDLGNANLSGPLVAQLGQLPNLQYLELYTNNITGKIPAEFGNLTNLVSLDLYANHISGSIPETLGNLKKLRFLRLNNNTLSGDIPMALTTVNSLQVLDLSKNKLKGVIPVNGSFLAFTQLSFNDNPDLKPLDVTPGPISPTPPPSPSGNSRTGTIAGGVAAAAALIFAAPAIALAYCRKRRPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDNFSNKNILGRGGFGKVYRGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRDRPESKPPLEWPVRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLEALVDADLGGDYNEEEAEHLIQLALLCTQSSAMERPKMSEVVRMLEGDGLAEKWEQWQKDEMHRRDNQTLLPNSSWPIVDSASHIPPDELSGPR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral33g00003 621 Pfam Protein kinase domain 299 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral33g00003 621 SMART serkin_6 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral33g00003 621 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Pral33g00003 621 SUPERFAMILY L domain-like 37 226 - -
Pral33g00003 621 Gene3D Phosphorylase Kinase; domain 1 267 374 - -
Pral33g00003 621 FunFam Somatic embryogenesis receptor kinase 1 33 222 - -
Pral33g00003 621 FunFam Somatic embryogenesis receptor kinase 1 267 374 - -
Pral33g00003 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Pral33g00003 621 MobiDBLite consensus disorder prediction 214 228 - -
Pral33g00003 621 MobiDBLite consensus disorder prediction 592 621 - -
Pral33g00003 621 Pfam Leucine rich repeat 101 161 IPR001611 GO:0005515
Pral33g00003 621 Gene3D Transferase(Phosphotransferase) domain 1 375 592 - -
Pral33g00003 621 SUPERFAMILY Protein kinase-like (PK-like) 278 573 IPR011009 -
Pral33g00003 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 15 583 - -
Pral33g00003 621 ProSiteProfiles Protein kinase domain profile. 298 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral33g00003 621 FunFam Somatic embryogenesis receptor-like kinase 1 375 592 - -
Pral33g00003 621 MobiDBLite consensus disorder prediction 210 233 - -
Pral33g00003 621 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Pral33g00003 621 Gene3D Ribonuclease Inhibitor 34 214 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral33g00003 Pral-Chr33 30737 38624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral33g00003 10 621 Receptor kinase-like Gene Family AT4G33430 73.565 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral33g00003 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral33g00003 K13416 - gmx:100800522 955.281