Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3399g00001 ATGGCTGCTCTTCAGAAACACGCTGTCGAATTCAAGGAGGATCCACGAAGCGTTGATCTCAGGCTTCACAGTGGTTGCTATGCCAGCGGAGAAGAAGAACCCACAACGGCGCTGATAGACGGACCCAAAGAAGAGCCGGCTTCGGAGGAGGTCTCTCCGGAGGCGATGCAGGTTATGCCAGTGGCGGTGCACGTGCCGCGAAAGAAGGCTTTGACGAAGGATCGTCACACGAAGGTCGAGGGGCGAGGCCGGAGGATCCGAATGCCCGCAACGTGCGCCGCTCGGATCTTCCAGTTGACCCGTGAATTGGGTCACAAGTCTGACGGTGAAACCATCCGATGGCTTCTCGAACATGCGGAGCCAGCCATCATCGCGGCCACTGGCACCGGCACCGTTCCCGCCATAGCCATGTCCGTTAACGGCACCCTCAAAATTCCAACTACCCCATCCACCCGCAACAAGCCCGAACCCGATGACCCACCTGAAAGGAAGAAGCAAAAGCGATCAACGAACAGTTCGTACACAGAGCTGAGCGACGGTGTTTCGGTTTCCGTCGGCCTTGCCCCGCTATCAACAACGGCGGTGACGACAAAGCCAAGCATCACGACAGTTAATACCCAACAAGCAAAAGTACAGTCAGCACAAGGATTGGTCCCCATGTGGGCTATACAGTCAAACGCCGTCGTTCCGGCGGGCACGTGCTTCTTAGTCCCTCCGATGGATTCCATAGCCGGAACTTCGACAAGCCAGCCGCAGATTTTGGCCATCCCCGTGAATGCTACGCCTCTGATCAACATTCCGGCGAGACCTATATCGGCTTTTGTTTCATTAATGGAGAACATTGTAGCCCCTGTTCAGTTCCAAGCAGCGACAACAATACCTCGGTGTTCAACTGCTCCGTCCTTGAAACCTCCGAAAGAAGCGAAGATTCCGGCACCGAGCTCAACATCTGTTGCTCCTACCACAAGCACAACCCAGAGGCTGAGAAAATTCTCATTAGAGATTCACGATAAGGAGAAGCTTCAGCTCAAGTCCAGCTGTTCAAAGCAGTGA 1053 0.547 MAALQKHAVEFKEDPRSVDLRLHSGCYASGEEEPTTALIDGPKEEPASEEVSPEAMQVMPVAVHVPRKKALTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTPSTRNKPEPDDPPERKKQKRSTNSSYTELSDGVSVSVGLAPLSTTAVTTKPSITTVNTQQAKVQSAQGLVPMWAIQSNAVVPAGTCFLVPPMDSIAGTSTSQPQILAIPVNATPLINIPARPISAFVSLMENIVAPVQFQAATTIPRCSTAPSLKPPKEAKIPAPSSTSVAPTTSTTQRLRKFSLEIHDKEKLQLKSSCSKQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3399g00001 350 MobiDBLite consensus disorder prediction 28 51 - -
Pral3399g00001 350 MobiDBLite consensus disorder prediction 298 325 - -
Pral3399g00001 350 MobiDBLite consensus disorder prediction 143 177 - -
Pral3399g00001 350 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
Pral3399g00001 350 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 60 233 IPR005333 GO:0003700
Pral3399g00001 350 MobiDBLite consensus disorder prediction 155 170 - -
Pral3399g00001 350 Pfam TCP family transcription factor 72 159 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3399g00001 Pral-Chr3399 3199 4815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3399g00001 1 254 TCP Transcription Factor Family AT2G45680 54.167 4.86e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral3399g00001 TCP 3.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3399g00001 - - pcin:129289238 523.087