Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3398g00027 ATGCTATTAAGCAATTTGGTTTTGGGACGAGGCAGTAGAGTCATTGCAACAAGTAGAGACAAGCACGTTCTTATTAGTGGAGGGATTGATGAAAAATATATATATGAAGTTGAGGAGTTAAATTTTAAAGAATCACTTGAACTTTTTAGTAGACATGCCTTCGGAAAAATTCGTCCCAATATGGGATATGAAGAGCTATCGAGAAGGACGGTAGATATTGCTAAAGGCATTCCTTTAGCTTTAGAAATTTTGGGTTCCCATTTTCATTCTAAGAATAAAGATTATTGGGAAAGTGAACTTGAAAGACTCCAAAAGTGTCCCCTTCAAAGAATTCAAAATATATTGAAGGTGAGTTTTTATGGATTGCATCCTATGGATAGGGAAATATTTTTGGATATTGCATTCTTTTTCTTGGGAGTAGAAAAGGCTGAACTTACTTATGCTTTAGAGGCTTGTCATCTCGGAGCAATCAGTGGAATACAAAATCTGATAGATAAAGCTCTCATAAAGTTAGATGGGCATGACCGAATTGTAATGCATGATTTGATACGAGAAATGGCTGAGCAGATAGTTCGTGAGGAATGTATGAAACATCCTGAGAGACGTAGCCGACTAAATGATGAGAATGAAATATGTGATATATTGAAAAGTAACATGGGAACTGATGAAATTGAAGGCATGATATTGTTCGTGAACAGAATAAAAAATTTACAATTGAGTGCTGACGCCTTCATGAAGATGAGAAATTTAAGAATTCTTAAAATTTTGGATTATTCAATGGGGCGGCCCAATACACGTATAGAGCTTCCTCATGGTCTTGACTATCTTCCTGACAAATTAAGGTATTTTTATTGGGATTATTGTCCATTAAAGTCTCTACCATTCGGCTCCTATCTTAAGAACCTTGTTGAACTTGACATGCGAAGAAGCAATGTTGAAAAGCTTTGGGATGGAAAACAGGACCTTGAGCATCTAAAGAAAATAGATTTGTCTTGGTCCCAACAATTGAGAGAGTTGGCTGATTTCTCTATGGCGCGTAAGCTTGAATTCGTATATCTTCGTGGATGCAAGAATTTGAGAACTATTCATCCATCTATTTTATCACTCAACACTATTGTTGAAGTGTGGGTAAATGATTGCCCGAAACTAGAGAGTATTGAAAGTGAGACTCATTTAGAATCTCTCACATTAGTCTGGGCTAGTGGTTGTGATAACCTCAAGAAATTCTCTCTGTCATCGAAGAAATTGAGAAAATTATATCTTAATAAGGGACATAAACTCGAAATATTTCACTTGCCAAATAGTCATTGCACAGAACTTAGAACGCTTGATGTTGATGGTGAAGGATTGAGGGGTCTTCCAATGGATGAGCTGCGTTGCTTGACAAATCTTGAGAGGTTTTGTGTTGATAATTTCAAGCAAGAAATTCACACAATGGAGCTGCACTCCCTTTTTGATGCTTGGCGTAATTTAACAGAACTATATTTGGAGAGGTGGAGTTTCTTGTTAGAAATCCCAGACAATATCAAACATCTTTCAAACTTGAAACGCTTTTTCGTGACCGAGTGTAAAAGGCTGAAGTCCATACTTGGACTTCCTCCCATGCTTCTAGTACTGGGTGCCACTGATTGCACTTCATTGGAGACTGTGTCCTCCGACTCTCTAGTTTTGACACGGTGTGACTTTTACTTCCATAACTGTGTGAAGTTGGATGAGCGTTCGCATGGCTTTATTGAGGAATTAACCCATTCGTCATTGACTTCACTGACTTTAGCCTCTAATGAGGATGGGCATTATTTTGCTTCAACTTGTTACCCAGGAAGCAGAGTTCCAAAGTGGATGGAATATAGACCCATGACGGAGGATTCTAATGCTATCGAATTTACTTGCAATCCAAAACGATCACACGACATATTATTTTGCTGCGTTGGTCCTAGTCAAGCCGTCTCAAAGGGATTCTTTTGTGGTGTTTACTGTGAATGCTATTGGGATGACAACAAGAAATATCGCTTTGGTTATTATGATCATTACTGTGTTTCTCATAGTCATGAACTGAATCAGGATCATGTTTTTCTATGGTACATTCATAGGGGCTTATTTGCTGCTAAGATTTCATGTGAATTCTTTGCGGAATTTTTGGATGAACATTTTTTCTCTGTCCCTGCAAAAGCATGTGGCGTCCACGTGATATATCACTAG 2199 0.3793 MLLSNLVLGRGSRVIATSRDKHVLISGGIDEKYIYEVEELNFKESLELFSRHAFGKIRPNMGYEELSRRTVDIAKGIPLALEILGSHFHSKNKDYWESELERLQKCPLQRIQNILKVSFYGLHPMDREIFLDIAFFFLGVEKAELTYALEACHLGAISGIQNLIDKALIKLDGHDRIVMHDLIREMAEQIVREECMKHPERRSRLNDENEICDILKSNMGTDEIEGMILFVNRIKNLQLSADAFMKMRNLRILKILDYSMGRPNTRIELPHGLDYLPDKLRYFYWDYCPLKSLPFGSYLKNLVELDMRRSNVEKLWDGKQDLEHLKKIDLSWSQQLRELADFSMARKLEFVYLRGCKNLRTIHPSILSLNTIVEVWVNDCPKLESIESETHLESLTLVWASGCDNLKKFSLSSKKLRKLYLNKGHKLEIFHLPNSHCTELRTLDVDGEGLRGLPMDELRCLTNLERFCVDNFKQEIHTMELHSLFDAWRNLTELYLERWSFLLEIPDNIKHLSNLKRFFVTECKRLKSILGLPPMLLVLGATDCTSLETVSSDSLVLTRCDFYFHNCVKLDERSHGFIEELTHSSLTSLTLASNEDGHYFASTCYPGSRVPKWMEYRPMTEDSNAIEFTCNPKRSHDILFCCVGPSQAVSKGFFCGVYCECYWDDNKKYRFGYYDHYCVSHSHELNQDHVFLWYIHRGLFAAKISCEFFAEFLDEHFFSVPAKACGVHVIYH 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3398g00027 732 Gene3D Ribonuclease Inhibitor 183 415 IPR032675 -
Pral3398g00027 732 Pfam Leucine Rich Repeat 301 320 IPR011713 -
Pral3398g00027 732 Gene3D - 39 123 IPR042197 -
Pral3398g00027 732 Pfam NB-ARC domain 10 111 IPR002182 GO:0043531
Pral3398g00027 732 Gene3D Ribonuclease Inhibitor 416 608 IPR032675 -
Pral3398g00027 732 PRINTS Disease resistance protein signature 74 88 - -
Pral3398g00027 732 PRINTS Disease resistance protein signature 320 336 - -
Pral3398g00027 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 133 IPR027417 -
Pral3398g00027 732 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 412 IPR044974 GO:0006952
Pral3398g00027 732 SUPERFAMILY L domain-like 178 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3398g00027 Pral-Chr3398 487792 491907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3398g00027 8 533 WRKY Transcription Factor Family AT4G12020 32.096 1.41e-57 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3398g00027 - - pcin:129316033 553.518