Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3398g00018 ATGGCTATGTTTGCTTCTGCTTCTTCTTCCCAAGTTCCTTCTGGAAATTATGAAGTTTTCATCAGCTTTAGAGGATCAGACGTCAGATTTGGTTTCCTCAACCATTTGACAAATGAGTTGCGTCGAGAGAGCATAGATGTCTATGTGGATGACAGGCTCGAAAGAGGAGAAGAAATATCATTAGCGCTTGTAAAAGCAATAGAAGGATCCAAGATAGCGTTGGTGATATTCTCAAAAGATTATGCTTTTTCACAGTGGTGCTTGGAAGAGCTTGTCAAAATCATAGAATGCAAGGAAACTGGTAAGCAGACTGTGATACCAATTTTTTACCACGTAGATCCATCAGATGTCAGGCACCAAAGAGGCACTTATGAGGAGGCATTCACTCATCATGAACAGAAGTTCAAAGACAACGTGCAAAAGTTGCAAATTTGGAGATCTGCCTTGAAAAAAACTGCAAACTTATCTGGTTATCATTCATCACATTTTCGAAATGAACCTGAACTCATCAATGTAATAGTTGAAAATGTCTTAAGAAAATTGGAAGATAACAGTTCAATTGTGCTGGGATCTCAACTCACTGGATTTCATCAAAATTTTACTAGTGTTGAATCATTAATGGAAAATGAGTTGCCAGAAGTTCGAGTTCTTGGAATTTGGGGCCCAGGAGGGATAGGCAAAACAACCCTTGCTCGTGCTATATTTCACAAATTCTCGTCTCAATTTGAAAGTCATTGTTTCTTAGACAATGTGAGAGAAGAATCAACAACGGTTGATGGTTTGAGTCCTTTGCTTCAAAAACTTTTTTTTGAGCTATTAGATAAAAAATACGACATAAATATGAACCGAGCAGTGAGAAGGCTGAAACAAAAAAAAGTGTTAATTGTACTTGATGATGTGGACAATCCAAAGCAACTAAAAGATCTGGTTGGACAACAACTTTACTTGGGAAGGGGCAGTAGAGTCATTGCAACAAGTAGAGACAAGCATGTTCTTAAGAGTGGAGGGATTCATGAAAAATATATACATGAAGTCAAAGAATTGAGTTTAGAAGAATCACTTGAACTGTTCAGCATGCATGCCTTCAATCAAAATCATCCCATTAAGGAATATGAAGAGCTATCAAATTTGACAGTTGCCTTGGCTGGAGGCATTCCTTTAGCTTTAGAAGTTCTAGGTTCCCATTTTCATTCTAGAGATGAAGCATATTGGAAAAGTGAGCTTAGCAAACTCCAAAAGTATCCCCCTCAGAATATTCAGGATAGATTGAAGAAAGATCAAGTTATTCCTGTGCTAGAGGCTTGTGGTTTCAAAGCGGTTAGTGGAATACAAAATCTTATAGATAAAGCTCTCGTGAAGTCAGGAAATCGATGA 1374 0.3777 MAMFASASSSQVPSGNYEVFISFRGSDVRFGFLNHLTNELRRESIDVYVDDRLERGEEISLALVKAIEGSKIALVIFSKDYAFSQWCLEELVKIIECKETGKQTVIPIFYHVDPSDVRHQRGTYEEAFTHHEQKFKDNVQKLQIWRSALKKTANLSGYHSSHFRNEPELINVIVENVLRKLEDNSSIVLGSQLTGFHQNFTSVESLMENELPEVRVLGIWGPGGIGKTTLARAIFHKFSSQFESHCFLDNVREESTTVDGLSPLLQKLFFELLDKKYDINMNRAVRRLKQKKVLIVLDDVDNPKQLKDLVGQQLYLGRGSRVIATSRDKHVLKSGGIHEKYIHEVKELSLEESLELFSMHAFNQNHPIKEYEELSNLTVALAGGIPLALEVLGSHFHSRDEAYWKSELSKLQKYPPQNIQDRLKKDQVIPVLEACGFKAVSGIQNLIDKALVKSGNR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3398g00018 457 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral3398g00018 457 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 183 - -
Pral3398g00018 457 Pfam NB-ARC domain 204 432 IPR002182 GO:0043531
Pral3398g00018 457 PRINTS Disease resistance protein signature 382 396 - -
Pral3398g00018 457 PRINTS Disease resistance protein signature 287 301 - -
Pral3398g00018 457 PRINTS Disease resistance protein signature 216 231 - -
Pral3398g00018 457 Gene3D - 191 341 IPR027417 -
Pral3398g00018 457 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral3398g00018 457 SMART AAA_5 213 343 IPR003593 GO:0016887
Pral3398g00018 457 SMART till_3 16 155 IPR000157 GO:0007165
Pral3398g00018 457 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 453 IPR044974 GO:0006952
Pral3398g00018 457 Gene3D - 347 427 IPR042197 -
Pral3398g00018 457 Gene3D - 14 188 IPR035897 -
Pral3398g00018 457 Pfam TIR domain 16 186 IPR000157 GO:0007165
Pral3398g00018 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 424 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3398g00018 Pral-Chr3398 409192 411016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3398g00018 14 452 WRKY Transcription Factor Family AT4G12020 28.025 1.37e-40 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3398g00018 - - pcin:129287860 581.252