Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3397g00009 ATGAGCCTCGCCGGTGCTTTTAATCTGGCGGATGTCGTGCCTTGGCTTGGGCGATTTGATCTTCAGGGACTGAAACGAGCCATCACAAAAATCGGTAAAGCATTTGACGAGATACTAGAGAAGATAATTGAAGAGCATGAAGATGCTATTAACTCACCAAAGGACCGACAAGACTTCATAGACATACTGCTCTCATTGATACACCACACCGTGGACGGACAAAACTATGGCATTGAACGAACTAACATTAAGGCTATTGCACTGGACATGATTGCTGGGGCATTCGAAACTTCTACCTCTGTCATTTTGTGGGCCTTATCTTCACTAATAAGGCATCCTAGGGTTATGAAAACCCTTCAAGAAGAGCTGGAAACTGTGGTTGGAAGGAACAAAATGGTGGAAGAGACAGACTTAGCAAAGCTTCATTATTTAGATATGGTGATCAAGGAGACCCTGAGATTATACCCTGCAGGAGCATTGACCCCTCGAGAGTCAACGGAGGATGCGGTAGTTGGTGGTTACTATGTGAAGAAAAACACTCGAGTTCTAATCAATATGTGGGCTGTAGGAAGAGATCCTAAGGTCTGGTTTAATGCCGAAGATTTCTGTCCGGAGAGGTTTGTCGAGAAGAACGTTGACTTTCGAGGACTTGACTTTGAGTTCATACCGTTTGGATCTGGTCGCAGAGGATGTCCTGGTATACACATGGGTTTGGTTACAGTTAAATTCGTTGTAGCTCAATTGGTTCATTGCTTTAATTGGGAGCTTCCGTTGGGACAGGATCCGAATCAATTGGACATGAGTGAGAAATTTGGCTTGTCACTCCCAAGAGCCAAGAACCTGTATGCTGTGCCGACTTCTCGCATTAAGCCCCATTAA 879 0.4471 MSLAGAFNLADVVPWLGRFDLQGLKRAITKIGKAFDEILEKIIEEHEDAINSPKDRQDFIDILLSLIHHTVDGQNYGIERTNIKAIALDMIAGAFETSTSVILWALSSLIRHPRVMKTLQEELETVVGRNKMVEETDLAKLHYLDMVIKETLRLYPAGALTPRESTEDAVVGGYYVKKNTRVLINMWAVGRDPKVWFNAEDFCPERFVEKNVDFRGLDFEFIPFGSGRRGCPGIHMGLVTVKFVVAQLVHCFNWELPLGQDPNQLDMSEKFGLSLPRAKNLYAVPTSRIKPH 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3397g00009 292 Gene3D Cytochrome P450 1 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS P450 superfamily signature 222 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS P450 superfamily signature 93 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 224 233 IPR017972 GO:0005506|GO:0016705
Pral3397g00009 292 PANTHER CYTOCHROME P450 93A3-LIKE 1 289 - -
Pral3397g00009 292 FunFam Uncharacterized protein 1 284 - -
Pral3397g00009 292 PRINTS E-class P450 group I signature 185 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS E-class P450 group I signature 102 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS E-class P450 group I signature 231 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS E-class P450 group I signature 221 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS E-class P450 group I signature 82 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 PRINTS E-class P450 group I signature 145 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 Coils Coil 116 136 - -
Pral3397g00009 292 Pfam Cytochrome P450 7 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00009 292 SUPERFAMILY Cytochrome P450 4 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3397g00009 Pral-Chr3397 180820 182370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3397g00009 3 289 Monolignol Biosynthesis Gene Families AT4G36220 42.345 2.01e-82 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3397g00009 - - gmx:100814172 399.438