Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3397g00004 ATGTTGCCTGCTTCCTCTTTGCCCTTCCCTTCCCTCCTCCTTCTTCCACTTCTCTTCCTTCTCTCAGCTCTGTTCCTATCCCTGTGCCTTAGACGACCTAAGCATGGCCAGAAACAACCGCCAGGGCCACCGGCCTGGCCGGTGATCGGCAACCTCCACCAGTTGGGTACTCTCCCGCACCGATTCCTTCAGTCTCTCGCGAAGCGCTATGGACCCATCATGTCCTTGCGACTCGGACAGGTCCCTGCTGTTGTTGTCTCTTCCCCTGATGCCGCCGAGCTTTTCCTCAGGACGCACGACGTCGCTTTTGCCAGCCGCCCAAGGACTCAAGCGTCGGATTTCCTTTCTTATGGCTCCAAGGGGATGGTTTTCTCTGAATATGGCCCTTACTGGCGCGACATGAGGAAGCTCTGTACTTTGCAGCTTTTTAGCTCATCGAAATTGGAGACGTTTGCTCCCTTAAGAAGGGAGGAATTGGGACAGCTGGTGAAGTCGATTGAGAAATCGGCGGCGGCGAGTGAGGTGGTGGATCTGACGGAGAAGGTGGAGCGGCTTGTAGAAGACATAATGTATAAAATGATATTTGGACGCAACAGGGACGATAGGTTTGATCTGAAGGGTCTTATTCATGAGGGGATGAAATTGGCTGGAGCCTTCAATATTGCAGATTTCGTGCCTTTCTTGGCGCCACTTGATATCCAGGGCTTTACAAGACGTTTGGTGAAGACGAGCAAGGAAGTTGATGAGATATTAGAGACCATTGTTAGAGAGCATGAAGAGGCAGCACCAGAAGAACAGAATAGACAACACAAGGACTTCGTGGACATACTACTCTCTTGCATGGATACCAATTACGATGATCACCACAACTTTGTCATAGATCGAACCAACATCAAAGCCATGCTTCTGGATATGATTGCTGCTGCATCAGACACTTCTTCTGGTGTCATTTTGTGGGCTTTTCCAGAACTCTTAAGGAATCCAAGGGTGATGAAAAAACTCCAACTCGAACTAGAAAACCGAGTAGGAAAAAGCAAAATGGTCGAGGAAGCCGATTTGCCAAGGTTGAGTTACTTAGATATGGTGGTTAAAGAGACTATGAGACTACACCCAGTGGACCCCTTACTAGTCCCTCGTGTGTGTAGGGAAGATATCATAATCAATGGCTATTACATAAGGAAGAATTCTCGAATCATAGTGAATTCATGGAGCATAGGAAGAGATCCTAAGGTATGGTCTGATAATGTGGAAGAATTTTTTCCAGAGAGGTTCTTGGATGGCAATATGGATTATCGAGGATATGAGTTCCAATTCTTACCATTCGGTTCTGGTCGAAGAGGCTGCCCTGGTCTGCAATTGGGTTTAATTACTGTTAAGCTTATCTTAGCACAGTTAGTGCACTGCTTCAACTGGGAACTTCCGGAGGACAAGTCTCCAGATGAGTTGGATATGACTGAGACATTTGGTTTGACAATGCCAAGAGCTAATCACTTGCTAGCTCTCCCATCTTATCGCCTACCAATTAATTGA 1530 0.4725 MLPASSLPFPSLLLLPLLFLLSALFLSLCLRRPKHGQKQPPGPPAWPVIGNLHQLGTLPHRFLQSLAKRYGPIMSLRLGQVPAVVVSSPDAAELFLRTHDVAFASRPRTQASDFLSYGSKGMVFSEYGPYWRDMRKLCTLQLFSSSKLETFAPLRREELGQLVKSIEKSAAASEVVDLTEKVERLVEDIMYKMIFGRNRDDRFDLKGLIHEGMKLAGAFNIADFVPFLAPLDIQGFTRRLVKTSKEVDEILETIVREHEEAAPEEQNRQHKDFVDILLSCMDTNYDDHHNFVIDRTNIKAMLLDMIAAASDTSSGVILWAFPELLRNPRVMKKLQLELENRVGKSKMVEEADLPRLSYLDMVVKETMRLHPVDPLLVPRVCREDIIINGYYIRKNSRIIVNSWSIGRDPKVWSDNVEEFFPERFLDGNMDYRGYEFQFLPFGSGRRGCPGLQLGLITVKLILAQLVHCFNWELPEDKSPDELDMTETFGLTMPRANHLLALPSYRLPIN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3397g00004 509 Gene3D Cytochrome P450 27 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PANTHER CYTOCHROME P450 93A3-LIKE 17 506 - -
Pral3397g00004 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Pral3397g00004 509 Coils Coil 168 188 - -
Pral3397g00004 509 Pfam Cytochrome P450 40 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 CDD CYP71-like 69 498 - -
Pral3397g00004 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 SUPERFAMILY Cytochrome P450 40 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3397g00004 509 FunFam Cytochrome P450 83B1 28 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3397g00004 Pral-Chr3397 51243 54585 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3397g00004 9 509 Cytochrome P450 AT5G07990 41.176 1.44e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3397g00004 - - qsa:O6P43_007971 623.239