Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3395g00008 ATGGAAAGCTTCATCAATGGATCATCATCAAGGCCGATCCATGTTTATATAAGTTTCAGAGGAGATAATGAAACTTGCAAGTTCACAGATAGGCTCTGGGCCGCTCTTGAAACTGACGATTTAAACACATTTTGGGATGACAAGAAGCTTGAGCTGGGTGATTCCATCTTTCTTCCCCGTCATTTCCTTAAACCAATTCGACAATCCAACATTTCTATTGTTGTCTTCTCCAAAAAGTATGCTTCATCCATATGGTGCCTTGAGGAGCTCTCAGAGATTGCTGCACGCATTCATGAACCACGATATACTGCTTTCCCAATTTTCTATGATGTCCATCCATCTGAGGTTCAAAACCAGAGTAACTCTTTTGAAACAGCTTTTGCTGAACATGAACAAAGGCTCACGGCAAATTTACGCAAGCTACACAATTGGAGGTCAGCAATGAAACAAGTGGCCGATCTCTTTGGTTGGTGTGTACCGCTAGAGCCAGAGCCGCAAGTTATTGATGACATCATCAGGGAGGTCAAGAGAAAAATGCGTGAACTATTTTATGCTGATGTAGATCTAGTAGGGATGCAATCTCGAGTGAGAGAAGTAGAAGAACTTCTGGATTTGGGTTCAAAAGATGACACTAGAGTTGTGGGCATCTGTGGTATGGGTGGAGTAGGGAAGTCAACTCTTGCGAGAGTTCTTCATGACAGGATCTCTCATCATTTTGATGCTTCTTATTTGGTACTCAATGCCTTTGAGTTCGATAAGGCATTAATGCTAAGAAATCCCAAGAGAACTCTCATAGTTCTCGATTGTGTTAATATTCATATTATTTTAGGATTGGTTACTTCTGTAAGAGAAAACCAGTTAGTTGGAGGGAGTAGAATCATCATAACAACTAGAGATGAAGGAGTGCTTGGAATGTTTATGAAGTGTTATATTTATAGGGTTAAACTACTGACCAAGAACGAAGCTCTTCTATTATTTTGTAGAAACGCTTTCAAATGTGATTTTCCAATGAGAGGTTATGAGGAGCAAATAAATAGTGTGCTCCAATATGCTAATGGCCTTCCATTAGCAATTGTGGTAATGGGCTCGTTGTTATATAATACAAGAGTCTCAGAATGGAGATCTGCTTTGGTTGCTATCAAAAAGGCTGCTCTCCGTATTATCATGAATGTCCTCATAAAAAGTTTTGATGATCTGAATTTTGACGCCAAGCAGATGTTTCTAGACATTGCATGCTTTTTCACTGGGAAAGAGATTAAATTTGTGGAAGGAATTTTGGACAGTACTCAGCCAGTTTTATCTAGTTATGGCCATCGAGGGAAGTACTGTATGCAAATTTTGATCGAGAAGTCACTCATGACCATTATAGATCAAAAGGTACACATGCATGGTTTAGTGCAAGAAATGGGACGAGAAATTGTTCGGCATAGATTCCCTGGTAAGCCAGAAACGTGGAGCAGATTATGGGATTTTGATGATATTTATGATGTTACGCAAAGTGGCAGAGCTAACTATAAAGTTGAAGCAATAGTCTTGGAGTTAGAAAATTCACATGGGAGTACATTGAGAGTTGAAGGTTTATCAACGATGCTCAATCTCAGACTACTCATATTTCGTAACGTGAAATTTTCTGGAGTTTTAAGGAGTCTTACAAGCAAGCTCCAATATATTTCATGGCACCAATATCCTTTCACATCATTACCATCAACTTTTGATCCATGTTTCCTAAGGGAATTGATTTTGACTGATAGCTGCATCAGATGCATATGGAATAATGCAAAAAAGTTTTCGCCATATCAGCGATTCCCTTACTTGAGAAACTTGAATCTCGGTGGTTCCAAAGATTTAACCAAGATGCCAGATTTCCAAAATTCTTTCCCAAGTCTTGAGAGGTTGGATCTTGAAGGATGCGTTAAATTATCAAAGCTTGATGCGTCTATAGGTTATCTTTCAACGCTCAAATTCTTAAATTTGAGAAATTGTGTTAATCTTTTTAGTATTCCTAATCGCTTGTTCTCTTTACCCTCTTTAGAAGTTATAAATTTAGCTTGTTGCTCTACATTTGCGTATTGTTTGAAGTTTTGTCCTCCTGAGGAGCTTAGTGAAGGAGAAACTATTGAGCAATCGCTTTCATGGAAGAGACGGAAGCTACGTTAG 2157 0.3871 MESFINGSSSRPIHVYISFRGDNETCKFTDRLWAALETDDLNTFWDDKKLELGDSIFLPRHFLKPIRQSNISIVVFSKKYASSIWCLEELSEIAARIHEPRYTAFPIFYDVHPSEVQNQSNSFETAFAEHEQRLTANLRKLHNWRSAMKQVADLFGWCVPLEPEPQVIDDIIREVKRKMRELFYADVDLVGMQSRVREVEELLDLGSKDDTRVVGICGMGGVGKSTLARVLHDRISHHFDASYLVLNAFEFDKALMLRNPKRTLIVLDCVNIHIILGLVTSVRENQLVGGSRIIITTRDEGVLGMFMKCYIYRVKLLTKNEALLLFCRNAFKCDFPMRGYEEQINSVLQYANGLPLAIVVMGSLLYNTRVSEWRSALVAIKKAALRIIMNVLIKSFDDLNFDAKQMFLDIACFFTGKEIKFVEGILDSTQPVLSSYGHRGKYCMQILIEKSLMTIIDQKVHMHGLVQEMGREIVRHRFPGKPETWSRLWDFDDIYDVTQSGRANYKVEAIVLELENSHGSTLRVEGLSTMLNLRLLIFRNVKFSGVLRSLTSKLQYISWHQYPFTSLPSTFDPCFLRELILTDSCIRCIWNNAKKFSPYQRFPYLRNLNLGGSKDLTKMPDFQNSFPSLERLDLEGCVKLSKLDASIGYLSTLKFLNLRNCVNLFSIPNRLFSLPSLEVINLACCSTFAYCLKFCPPEELSEGETIEQSLSWKRRKLR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3395g00008 718 ProSiteProfiles TIR domain profile. 11 179 IPR000157 GO:0007165
Pral3395g00008 718 Gene3D - 316 400 IPR042197 -
Pral3395g00008 718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 686 IPR044974 GO:0006952
Pral3395g00008 718 SUPERFAMILY L domain-like 511 686 - -
Pral3395g00008 718 PRINTS Disease resistance protein signature 351 365 - -
Pral3395g00008 718 PRINTS Disease resistance protein signature 213 228 - -
Pral3395g00008 718 PRINTS Disease resistance protein signature 624 640 - -
Pral3395g00008 718 Gene3D - 180 258 IPR027417 -
Pral3395g00008 718 Gene3D Ribonuclease Inhibitor 504 703 IPR032675 -
Pral3395g00008 718 SMART till_3 12 154 IPR000157 GO:0007165
Pral3395g00008 718 Gene3D - 6 179 IPR035897 -
Pral3395g00008 718 SUPERFAMILY "Winged helix" DNA-binding domain 388 497 IPR036390 -
Pral3395g00008 718 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Pral3395g00008 718 Pfam TIR domain 14 178 IPR000157 GO:0007165
Pral3395g00008 718 Pfam NB-ARC domain 260 386 IPR002182 GO:0043531
Pral3395g00008 718 Pfam NB-ARC domain 195 243 IPR002182 GO:0043531
Pral3395g00008 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 410 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3395g00008 Pral-Chr3395 220098 222622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3395g00008 53 710 WRKY Transcription Factor Family AT4G12020 29.114 2.52e-58 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3395g00008 - - pcin:129316386 801.586