Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3395g00006 ATGAAAGTGACGAAGGAGAATTTCATAAGCGGACCGCCATCATCATCAAGGCCGATTCATGTGTATCTAAGTTTCAAAGGAGATGATGAAAGCTGCAAATTCACAGATAGGCTTTGGGCTTCTCTTGAAACTGACGATTTAAATACCTTTTGGGATGACAAGAAACTCGAGACAGGTTTTTCTAGCATTCCGCATCACTTTCTCAAAGCAATTCAACAGTCATGTGTTTCCATCGTCGTCTTCTCCAGAAACTATGCCTCTTCTATATGGTGTCTTGAGGAACTTTCTAAGATTGCTGAGCGCATTCATGAACCACGATATACTATTCTCCCAATCTTCTATGATGTAGATCCATCTGAGGTACAAAACCAGAGTAATTCTTTCCAGCAAGCTTTCGTTGATCACGAACAAAGGTTTACAGCAAATCTACGAAGAGTACACACCTGGAGGTTAGCAATGAAACGAGTGGCCAATCTCTTTGGTTGGCATGTACAGCATGAGTTAGGGCCACAAGTTATTGATGATATCATAATAAAGGTCAAGAGAAGAATGCGTGAATTAGTTTACGTTGATGTAGATTTGGTAGGGATGAAATCTCGGGTGAATGACGTAGAAAAACTTCTCGACTTGGGTTCAAATGATGGGGTTCGAGTTCTGGGCATTTGTGATCAAAAAATAGAAATGCATGGTCTATTGCAAGAAATGGGAAGAGAAATTGTTCAGCTTAAGTTCCCTTCCATGCCAGAAAGGTGGAGTAGATTGTGGGATTTCAATGATATTTTTCGTGTTATGCAAAATGACACAGCTTCCGGAGTAGTTCAAGCAATAGTCCTGGATTTAGAAGATTCACAGCAAAGGGCATTAAGGGTCCAAGCTTTATCAAATATGGGCAATCTTAAACTACTCATATTTCGTAACGTTAAGTTTTGTGGATCCCTCAAGCATCTTTCAAATGAGCTTCGATATGTTTCATGGCACCAGTATCCTTTCCCTTGTTTACCGTCAAGTTTTGTGCCACATAATCTCATTGAATTGATTTTGCCTGATAGCTCCATCACAAACATATGGGAAGGAGAAAAGGCACCAGATAGCTCCATCATAAATACAAGGGCAGTAGAACCAAAAGTAGCTGTTTGGCACCTCACAGATATTCGGGAAGCAGCCCGAACTAAATTCTTAAATTTGAGAAGGGAAAAAGACCGAGAAGCACATGAGAGCTGCATCACTAATAGACGGGAAGGAGATATGGCCTTCCCTTTGAGAAATATGAATCTTAGTGGCTCCAAAAATCTGGTCAAGTTGCCTGATTTCAAAAGATTTCCAAATCTTAAGCGATTAGACCTTGAAGGATGCACGCAATTATCACGGCTTGATGTATCTATTGCTTATCTTTCAATTCTCAAATTCTTAAATTTGAGAAATTGTATTAATCTAGTTAGTATTCCAAATCACTTATTTTCTCTACCCTCTTTAAAAGTTTTAAATTTAGCTGGTTGTTCCAAATTTGCATATTGTTTGAAATTTTGTCCTTTTGAGGAGCGTGATGAAAGAGAAGCCATTGAACAATCATTTTCCCACAGGAGACAGAAGCTATGTAGACAAAAATCTATATAA 1614 0.3885 MKVTKENFISGPPSSSRPIHVYLSFKGDDESCKFTDRLWASLETDDLNTFWDDKKLETGFSSIPHHFLKAIQQSCVSIVVFSRNYASSIWCLEELSKIAERIHEPRYTILPIFYDVDPSEVQNQSNSFQQAFVDHEQRFTANLRRVHTWRLAMKRVANLFGWHVQHELGPQVIDDIIIKVKRRMRELVYVDVDLVGMKSRVNDVEKLLDLGSNDGVRVLGICDQKIEMHGLLQEMGREIVQLKFPSMPERWSRLWDFNDIFRVMQNDTASGVVQAIVLDLEDSQQRALRVQALSNMGNLKLLIFRNVKFCGSLKHLSNELRYVSWHQYPFPCLPSSFVPHNLIELILPDSSITNIWEGEKAPDSSIINTRAVEPKVAVWHLTDIREAARTKFLNLRREKDREAHESCITNRREGDMAFPLRNMNLSGSKNLVKLPDFKRFPNLKRLDLEGCTQLSRLDVSIAYLSILKFLNLRNCINLVSIPNHLFSLPSLKVLNLAGCSKFAYCLKFCPFEERDEREAIEQSFSHRRQKLCRQKSI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3395g00006 537 Pfam Leucine Rich Repeat 341 360 IPR011713 -
Pral3395g00006 537 ProSiteProfiles TIR domain profile. 17 184 IPR000157 GO:0007165
Pral3395g00006 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 226 503 IPR044974 GO:0006952
Pral3395g00006 537 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Pral3395g00006 537 SUPERFAMILY L domain-like 270 500 - -
Pral3395g00006 537 Gene3D Ribonuclease Inhibitor 255 506 IPR032675 -
Pral3395g00006 537 SMART till_3 18 159 IPR000157 GO:0007165
Pral3395g00006 537 Gene3D - 16 188 IPR035897 -
Pral3395g00006 537 Pfam TIR domain 20 170 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3395g00006 Pral-Chr3395 197553 206951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3395g00006 226 503 WRKY Transcription Factor Family AT4G12020 33.566 2.26e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3395g00006 - - pcin:129316386 305.834