Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3395g00005 ATGAAAGTGACGAAGGAGAATTTCATAAGCGGACCGCCATCATCATCAAGGCCGATTCATGTGTATCTAAGTTTCAAAGGAGATGATGAAAGCTGCAAATTCACAGATAGGCTTTGGGCTTCTCTTGAAACTGACGATTTAAATACCTTTTGGGATGACAAGAAACTCGAGACAGGTTTTTCTAGCATTCCGCATCACTTTCTCAAAGCAATTCAACAGTCATGTGTTTCCATCGTCGTCTTCTCCAGAAACTATGCCTCTTCTATATGGTGTCTTGAGGAACTTTCTAAGATTGCTGAGCGCATTCATGAACCACGATATACTATTCTCCCAATCTTCTATGATGTAGATCCATCTGAGGTACAAAACCAGAGTAATTCTTTCCAGCAAGCTTTCGTTGATCACGAACAAAGGTTTACAGCAAATCTACGAAGAGTACACACCTGGAGGTTAGCAATGAAACGAGTGGCCAATCTCTTTGGTTGGCATGTACAGCATGAGTTAGGGCCACAAGTTATTGATGATATCATAATAAAGGTCAAGAGAAGAATGCGTGAATTAGTTTACGTTGATGTAGATTTGGTAGGGATGAAATCTCGGGTGAATGACGTAGAAAAACTTCTCGACTTGGGTTCAAATGATGGGGTTCGAGTTCTGGGCATTTGTGGAATGGGCGGAATAGGGAAGACAACTCTTGTCAGAGTTCTCTATGATAGGATCTCTTACCGCTTTGATGCTTGTTATTTTCTACCTAACCTATCTGAATTTTATACCAGGAGACTAGCATGTGGAAAGATTATTCTCATGATTCTCGATGGCATTGATAAGAACCAAAATCTAATGCCCCTAATCAAGCCTATAAGAACTAATTGGTTAGGTGGAGGAAGTAGAATTATCATAACAACCAGAGATGAAAGAGTCCTTAAAATCTTTGGGAAGTATGATATCTATCGGGTTAATCCATTGGCCAAGGATGAAGCTCTTCAATTATTTTGCAGAAAAGTTTTCAAATGTGATTTTCATGCCAGAGATTATAAGCAGCAAATAAATAGTGTACTCCAATTTGCTAACGGCCTTCCATTGGCAATTATGATATTGGGCTCATTATTGTATAATAGAAAAGTCTCAGAATGGGGAAGTACTTGGGTTGAAATAAAAAAGGTTGCTACCCAGATGATCATGAAGGTACTCAAAAAGAGTTTTGATGAACTGGATCGTGACAGCAAGGAAATATTTCTCGACATTGCTTGTTTTTTCAGAGGGAAGAAGATTAAACATGTAAAAGGAATTTTAAATAGTTATAGATTTGTTGATCAAAAGAAAAATACCCCAGTGAAGGAGGAAATACAACTTTTAATTGAAACATCACTCATAACCATTATAGATCAAAAAATAGAAATGCATGGTCTATTGCAAGAAATGGGAAGAGAAATTGTTCAGCTTAAGTTCCCTTCCATGCCAGAAAGGTGGAGTAGATTGTGGGATTTCAATGATATTTTTCGTGTTATGCAAAATGACACAGCTTCCGGAGTAGTTCAAGCAATAGTCCTGGATTTAGAAGATTCACAGCAAAGGGCATTAAGGGTCCAAGCTTTATCAAATATGGGCAATCTTAAACTACTCATATTTCGTAACGTTAAGTTTTGTGGATCCCTCAAGCATCTTTCAAATGAGCTTCGATATGTTTCATGGCACCAGTATCCTTTCCCTTGTTTACCGTCAAGTTTTGTGCCACATAATCTCATTGAATTGATTTTGCCTGATAGCTCCATCACAAACATATGGGAAGGAGAAAAGGCACCAGATAGCTCCATCATAAATACAAGGGCAGTAGAACCAAAAGTAGCTGTTTGGCACCTCACAGATATTCGGGAAGCAGCCCGAACTAAATTCTTAAATTTGAGAAGGGAAAAAGACCGAGAAGCACATGAGAGCTGCATCACTAATAGACGGGAAGGAGATATGGCCTTCCCTTTGAGAAATATGAATCTTAGTGGCTCCAAAAATCTGGTCAAGTTGCCTGATTTCAAAAGATTTCCAAATCTTAAGCGATTAGACCTTGAAGGATGCACGCAATTATCACGGCTTGATGTATCTATTGCTTATCTTTCAATTCTCAAATTCTTAAATTTGAGAAATTGTATTAATCTAGTTAGTATTCCAAATCACTTATTTTCTCTACCCTCTTTAAAAGTTTTAAATTTAGCTGGTTGTTCCAAATTTGCATATTGTTTGAAATTTTGTCCTTTTGAGGAGCGTGATGAAAGAGAAGCCATTGAACAATCATTTTCCCACAGGAGACAGAAGCTATGTAGACAAAAATCTATATAA 2331 0.3771 MKVTKENFISGPPSSSRPIHVYLSFKGDDESCKFTDRLWASLETDDLNTFWDDKKLETGFSSIPHHFLKAIQQSCVSIVVFSRNYASSIWCLEELSKIAERIHEPRYTILPIFYDVDPSEVQNQSNSFQQAFVDHEQRFTANLRRVHTWRLAMKRVANLFGWHVQHELGPQVIDDIIIKVKRRMRELVYVDVDLVGMKSRVNDVEKLLDLGSNDGVRVLGICGMGGIGKTTLVRVLYDRISYRFDACYFLPNLSEFYTRRLACGKIILMILDGIDKNQNLMPLIKPIRTNWLGGGSRIIITTRDERVLKIFGKYDIYRVNPLAKDEALQLFCRKVFKCDFHARDYKQQINSVLQFANGLPLAIMILGSLLYNRKVSEWGSTWVEIKKVATQMIMKVLKKSFDELDRDSKEIFLDIACFFRGKKIKHVKGILNSYRFVDQKKNTPVKEEIQLLIETSLITIIDQKIEMHGLLQEMGREIVQLKFPSMPERWSRLWDFNDIFRVMQNDTASGVVQAIVLDLEDSQQRALRVQALSNMGNLKLLIFRNVKFCGSLKHLSNELRYVSWHQYPFPCLPSSFVPHNLIELILPDSSITNIWEGEKAPDSSIINTRAVEPKVAVWHLTDIREAARTKFLNLRREKDREAHESCITNRREGDMAFPLRNMNLSGSKNLVKLPDFKRFPNLKRLDLEGCTQLSRLDVSIAYLSILKFLNLRNCINLVSIPNHLFSLPSLKVLNLAGCSKFAYCLKFCPFEERDEREAIEQSFSHRRQKLCRQKSI 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3395g00005 776 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 742 IPR044974 GO:0006952
Pral3395g00005 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 415 IPR027417 -
Pral3395g00005 776 Gene3D - 256 314 IPR027417 -
Pral3395g00005 776 Gene3D - 184 255 IPR027417 -
Pral3395g00005 776 ProSiteProfiles TIR domain profile. 17 184 IPR000157 GO:0007165
Pral3395g00005 776 SUPERFAMILY "Winged helix" DNA-binding domain 393 503 IPR036390 -
Pral3395g00005 776 Gene3D - 16 183 IPR035897 -
Pral3395g00005 776 Pfam TIR domain 20 168 IPR000157 GO:0007165
Pral3395g00005 776 Gene3D - 322 405 IPR042197 -
Pral3395g00005 776 PRINTS Disease resistance protein signature 356 370 - -
Pral3395g00005 776 PRINTS Disease resistance protein signature 725 741 - -
Pral3395g00005 776 PRINTS Disease resistance protein signature 218 233 - -
Pral3395g00005 776 SUPERFAMILY L domain-like 509 739 - -
Pral3395g00005 776 Gene3D Ribonuclease Inhibitor 494 746 IPR032675 -
Pral3395g00005 776 SMART till_3 18 159 IPR000157 GO:0007165
Pral3395g00005 776 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Pral3395g00005 776 Pfam NB-ARC domain 265 403 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3395g00005 Pral-Chr3395 197553 206951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3395g00005 68 742 WRKY Transcription Factor Family AT4G12020 29.068 3.33e-65 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3395g00005 - - pcin:129316386 830.861