Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3395g00004 ATGGAAATAAACTATGCCTCTTCTATATGGTGTCTTGAGGAACTTTCTAAGATTGCTGAGCGCATTCATGAACCACGATATACTATTCTCCCAATCTTCTATGATGTAGATCCATCTGAGGTACAAAACCAGAGTAATTCTTTCCAGCAAGCTTTCGTTGATCACGAACAAAGGTTTACAGCAAATCTACGAAGAGTACACACCTGGAGGTTAGCAATGAAACGAGTGGCCAATCTCTTTGGTTGGCATGTACAGCATGAGTTAGGGCCACAAGTTATTGATGATATCATAATAAAGGTCAAGAGAAGAATGCGTGAATTAGTTTACGTTGATGTAGATTTGGTAGGGATGAAATCTCGGGTGAATGACGTAGAAAAACTTCTCGACTTGGGTTCAAATGATGGGGTTCGAGTTCTGGGCATTTGTGGAATGGGCGGAATAGGGAAGACAACTCTTGTCAGAGTTCTCTATGATAGGATCTCTTACCGCTTTGATGCTTGTTATTTTCTACCTAACCTATCTGAATTTTATACCAGGAGACTAGCATGTGGAAAGATTATTCTCATGATTCTCGATGGCATTGATAAGAACCAAAATCTAATGCCCCTAATCAAGCCTATAAGAACTAATTGGTTAGGTGGAGGAAGTAGAATTATCATAACAACCAGAGATGAAAGAGTCCTTAAAATCTTTGGGAAGTATGATATCTATCGGGTTAATCCATTGGCCAAGGATGAAGCTCTTCAATTATTTTGCAGAAAAGTTTTCAAATGTGATTTTCATGCCAGAGATTATAAGCAGCAAATAAATAGTGTACTCCAATTTGCTAACGGCCTTCCATTGGCAATTATGATATTGGGCTCATTATTGTATAATAGAAAAGTCTCAGAATGGGGAAGTACTTGGGTTGAAATAAAAAAGGTTGCTACCCAGATGATCATGAAGGTACTCAAAAAGAGTTTTGATGAACTGGATCGTGACAGCAAGGAAATATTTCTCGACATTGCTTGTTTTTTCAGAGGGAAGAAGATTAAACATGTAAAAGGAATTTTAAATAGTTATAGATTTGTTGATCAAAAGAAAAATACCCCAGTGAAGGAGGAAATACAACTTTTAATTGAAACATCACTCATAACCATTATAGATCAAAAAATAGAAATGCATGGTCTATTGCAAGAAATGGGAAGAGAAATTGTTCAGCTTAAGTTCCCTTCCATGCCAGAAAGGTGGAGTAGATTGTGGGATTTCAATGATATTTTTCGTGTTATGCAAAATGACACAGCTTCCGGAGTAGTTCAAGCAATAGTCCTGGATTTAGAAGATTCACAGCAAAGGGCATTAAGGGTCCAAGCTTTATCAAATATGGGCAATCTTAAACTACTCATATTTCGTAACGTTAAGTTTTGTGGATCCCTCAAGCATCTTTCAAATGAGCTTCGATATGTTTCATGGCACCAGTATCCTTTCCCTTGTTTACCGTCAAGTTTTGTGCCACATAATCTCATTGAATTGATTTTGCCTGATAGCTCCATCACAAACATATGGGAAGGAGAAAAGGCACCAGATAGCTCCATCATAAATACAAGGGCAGTAGAACCAAAAGTAGCTGTTTGGCACCTCACAGATATTCGGGAAGCAGCCCGAACTAAATTCTTAAATTTGAGAAGGGAAAAAGACCGAGAAGCACATGAGAGCTGCATCACTAATAGACGGGAAGGAGATATGGCCTTCCCTTTGAGAAATATGAATCTTAGTGGCTCCAAAAATCTGGTCAAGTTGCCTGATTTCAAAAGATTTCCAAATCTTAAGCGATTAGACCTTGAAGGATGCACGCAATTATCACGGCTTGATGTATCTATTGCTTATCTTTCAATTCTCAAATTCTTAAATTTGAGAAATTGTATTAATCTAGTTAGTATTCCAAATCACTTATTTTCTCTACCCTCTTTAAAAGTTTTAAATTTAGCTGGTTGTTCCAAATTTGCATATTGTTTGAAATTTTGTCCTTTTGAGGAGCGTGATGAAAGAGAAGCCATTGAACAATCATTTTCCCACAGGAGACAGAAGCTATGTAGACAAAAATCTATATAA 2091 0.3721 MEINYASSIWCLEELSKIAERIHEPRYTILPIFYDVDPSEVQNQSNSFQQAFVDHEQRFTANLRRVHTWRLAMKRVANLFGWHVQHELGPQVIDDIIIKVKRRMRELVYVDVDLVGMKSRVNDVEKLLDLGSNDGVRVLGICGMGGIGKTTLVRVLYDRISYRFDACYFLPNLSEFYTRRLACGKIILMILDGIDKNQNLMPLIKPIRTNWLGGGSRIIITTRDERVLKIFGKYDIYRVNPLAKDEALQLFCRKVFKCDFHARDYKQQINSVLQFANGLPLAIMILGSLLYNRKVSEWGSTWVEIKKVATQMIMKVLKKSFDELDRDSKEIFLDIACFFRGKKIKHVKGILNSYRFVDQKKNTPVKEEIQLLIETSLITIIDQKIEMHGLLQEMGREIVQLKFPSMPERWSRLWDFNDIFRVMQNDTASGVVQAIVLDLEDSQQRALRVQALSNMGNLKLLIFRNVKFCGSLKHLSNELRYVSWHQYPFPCLPSSFVPHNLIELILPDSSITNIWEGEKAPDSSIINTRAVEPKVAVWHLTDIREAARTKFLNLRREKDREAHESCITNRREGDMAFPLRNMNLSGSKNLVKLPDFKRFPNLKRLDLEGCTQLSRLDVSIAYLSILKFLNLRNCINLVSIPNHLFSLPSLKVLNLAGCSKFAYCLKFCPFEERDEREAIEQSFSHRRQKLCRQKSI 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3395g00004 696 Gene3D Ribonuclease Inhibitor 414 666 IPR032675 -
Pral3395g00004 696 Gene3D - 242 325 IPR042197 -
Pral3395g00004 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 335 IPR027417 -
Pral3395g00004 696 PRINTS Disease resistance protein signature 276 290 - -
Pral3395g00004 696 PRINTS Disease resistance protein signature 138 153 - -
Pral3395g00004 696 PRINTS Disease resistance protein signature 645 661 - -
Pral3395g00004 696 ProSiteProfiles TIR domain profile. 1 104 IPR000157 GO:0007165
Pral3395g00004 696 Pfam TIR domain 4 88 IPR000157 GO:0007165
Pral3395g00004 696 SUPERFAMILY L domain-like 429 659 - -
Pral3395g00004 696 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 82 IPR035897 -
Pral3395g00004 696 Gene3D - 104 175 IPR027417 -
Pral3395g00004 696 Gene3D - 176 234 IPR027417 -
Pral3395g00004 696 SUPERFAMILY "Winged helix" DNA-binding domain 313 423 IPR036390 -
Pral3395g00004 696 Pfam NB-ARC domain 186 323 IPR002182 GO:0043531
Pral3395g00004 696 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 662 IPR044974 GO:0006952
Pral3395g00004 696 Gene3D - 1 103 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3395g00004 Pral-Chr3395 182712 206951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3395g00004 7 662 WRKY Transcription Factor Family AT4G12020 29.143 4.19e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3395g00004 - - pcin:129316386 730.324