Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3395g00002 ATGGCTTCGTCTTCTTCCTCTACTCCATCTTCTCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTTAGAGGTGAGGACACCCGCTTCAATTTCACTAGCCACCTTCATGAAGCACTTCGTAGAAACCATGTAGATACATACATCGACTACAGACTTGAGAAAGGAGATGAGGTATGGCCATCTCTTGAGAAAGCCATCGAAGATTCAACTCTCTTCCTTGTGATCTTCTCAAAAAACTATGCATCTTCCACGTGGACCTTGAAGGAGCTTTCAAAAATATTAGACTGCTCCAAAAATCAAGGTCACCAGCTTGTTATGCCAGTGTTCTATAGAGTAGATCCTTCACATGTGAGGAAGCAGTCTGGGAGTTACCAGAAAGCATTTGAAGAACATGAGCTTAAAAGCATCAACAACCAACATCTACACATGTGGAGGAAGGCTCTCACTCATGCTGCCAATTTATCTGGTTGGCATTGTAGCTTCGATAGGGATGAAGCGGAGCTAATTAAAGAAATAGTGAAATGTGTTATACACAAGTTAGGCTGTAATTATCAAAGTGAAGATTATCTAAAAGATTTGATCGGAATTCAGAAAAGAATGGCAGATGTAGAATCATTGTTAGAAAAAGATTCAAATGATGATGTGCGATTTATTGGCATTTGGGCTATGGGTGGTATGGGCAAAACGACTCTTGCAAAAGCATTGTTTAGCAAATTGCGTTTTGGATATGAAGGGTCTTACTTTTTGGCTAATGTAAGGGAAGAATCAAAGAAATGTGGAATAGATGCTTTGAGGGAAAAGCTCATTTTGAACTTATTAGGGGATAAAGAATCTCACATTGACATGGTTGATGGTGCAATATCTTCTTATGCCATGAGGAGACTTAGCCGCAAAAAAAGTTTCGTTGTTCTTGATGATGTTGATGATCTTGAACAATTAGAAAAATTAGCAGGAAAACATGATTGGTTTGGACCAGGTAGTAAAATATTGATAACAACCAGAGATAAGCAAGTTTTTGGTAAGGAAGTAGATGATATATATCAGCTTGAGGCTTTGAATTCTGATGAGGCTTTTCAACTTTTCTCCTTAAATGCCTTCAAAAAACACTATGATGGTGATCCAAAGATACGAGAGCTGGTAGAAAAAATTACTCACTATGCAGGTGGAAATCCATTGGCCTTAAAAGTTTTAGGTTCCTTTTTGTATGGCAAAAATCAAGAAGCATGGCAGAGCCAATTGGAAAAGCTTACAAAATTACCTTGTCCAAAAATTAATGATATCCTCAAATTGAGTCTTGAAGAACTTGATTCTGAAGAGAAAAGTATTTTCTTGCATATCTCATGTCTCCTCAATTATTGTGATGCTGAAGATATAAAAAATTTGTTAGATGCATGTGGTTATTCAACTGAGATTGGATTGATGAGACTTGAAGATAAAGCTCTTTTAGAAATTCATGAAAGAAGAATATCAGGAGAAATTCATGAAAGAAAAATATGTATGCACCATTTGATAAAAGAAATGGGTCAACAAATTGTTCGTGAAGAATCGTTAAATGATCCTAAAAGGTGCAATATATTATGGATTTCCAAGAAAAATTCTGACATAGTGAAGAAAAACATGGGAAGTGCAGCTACCGAAGGCATAATTCTGAACCTTTCCGAAGTTGAAGAGATGTGCTTCAATAAAAACGCTTTCCGTTCAATGCCCAATCTAAAGTTTCTATGTTTTGATAGAAATTTGGATTATCAGTTCAGGAACAAGTTAAACTTTCCCTGTGGTATAGAGTTTTTACCAAAAAATCTCAGACTCTTGCATTGGGTGGGATACCCTTTAAAGGCCTTGCCAGCAAAATTCGAGATTGAAAATCTTGTTCAAATTATAATGCCTCATAGCAATTTGACAAAACTTTGGGATGGAGTGCAGAATCTCGTGAATTTACGTGGAATTAACCTCCATGGATCAAAAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCAATACATCTTGCAGAAGTGAATCTCAATGATTGTTCAAAATTGCAGGGTGTTCATCCATCTATTTTATCCCTCAATAGTCTTTGTTATTTAAGACTAAGAGGTTGTGAAGCCCTTACCAACCTTACAAGCAATACCCATCTCCAATCACTAGAGTATCTGGACCTAACAGAATGCTCAAGATTGAACAAATTTTCAGTGACCTCAGAAAACAGTGGGTTTGAATTGATACTTTCGGGAACGGCCATCAATGACGAGTTGTGCTCATCAAGTGGACGTCTCAGCAAAATTGGTTCATTGTTTCTAGACGAATGCAAAAGTGTGAAAAGTCTTCCCTACAAATTGGTTGACTTGCGCAACCTCGGACGTCTTGATGCTAACGGATGTAATAAGGTAGCATCAAATCTACTTTCCATATTTGATGAGATGCGTGCTTTGGAAGTTCTATATCTAAATGATTGTAGTGAATCATTTGAAGTTCCTGATAACATCAGCTTGTTATCGTCATTGCGTACGTTAAGTTTGTCAAGGAGTAATATAGAGACATTGCCTTCAAGCATCAAACACCTTTCGAGCCTGAAAGAACTTAACGTAAATAGATGCGAAAGGCTTCGGTCCCTACCAGAACTACCTCCCTCTATCTTAGACCTATCTGCCAGGGACTGCCTATCCCTTGTGTCCCTACAGTTACCTTTAATGAGAGAAGATGGAGAACAAAAAGAAGATCAAACAAAACTGTGCTTTGCTTTCACTAGTTGCATGAAGTTGGATCAACAATCAATCAAAGCTTGCGAGGCAAAAGTGGTACACGAGATAAGTAAAGCCACTTGTTGCGGGGCTTATGTGGAATATCCAGGAGAAAGAGTTCCAGATTGGTTCATGTATAGGTCTATACGGTCATCTGTCATAACTGTGGATCTCCGTTCTATTCCACAACCTTGGGATGGCTGTTTCATTTTCTGCGTCGTCATTTTGAAGTCACCACCGATGGCAGCAGTTGACGCCAAATGCTTTATTGATGGTCAATATGCTTGCACGTATGAAGGTGGGTTTATCTATGATCCTCTATTGTCAGATCATGTTGTCATTTGGTACGACGCATGTTCTTGTGGAGAACTACAAAGGAAAATTGAAGAGAAGAAAAGGGATGCTCACAGCGACACTTATATCCCATTGCTTCAAATTCAATTCACAGTTGCTGCATTAATAAGAGGAGAGATCAAAGAGTGTGGGGTATGTCCCACATCAGCACTACTTGAATATCAAAATTACATTCAACAAATTCGATTGCCATTGCATCCACATCCTAGCTCTGATACAATGCAAACGCCGTCTCGAAAGCGCAAATATCACAGCTTACTTCGTTGA 3366 0.3824 MASSSSSTPSSQSPKKYDVFISFRGEDTRFNFTSHLHEALRRNHVDTYIDYRLEKGDEVWPSLEKAIEDSTLFLVIFSKNYASSTWTLKELSKILDCSKNQGHQLVMPVFYRVDPSHVRKQSGSYQKAFEEHELKSINNQHLHMWRKALTHAANLSGWHCSFDRDEAELIKEIVKCVIHKLGCNYQSEDYLKDLIGIQKRMADVESLLEKDSNDDVRFIGIWAMGGMGKTTLAKALFSKLRFGYEGSYFLANVREESKKCGIDALREKLILNLLGDKESHIDMVDGAISSYAMRRLSRKKSFVVLDDVDDLEQLEKLAGKHDWFGPGSKILITTRDKQVFGKEVDDIYQLEALNSDEAFQLFSLNAFKKHYDGDPKIRELVEKITHYAGGNPLALKVLGSFLYGKNQEAWQSQLEKLTKLPCPKINDILKLSLEELDSEEKSIFLHISCLLNYCDAEDIKNLLDACGYSTEIGLMRLEDKALLEIHERRISGEIHERKICMHHLIKEMGQQIVREESLNDPKRCNILWISKKNSDIVKKNMGSAATEGIILNLSEVEEMCFNKNAFRSMPNLKFLCFDRNLDYQFRNKLNFPCGIEFLPKNLRLLHWVGYPLKALPAKFEIENLVQIIMPHSNLTKLWDGVQNLVNLRGINLHGSKDLIELPNFSKAIHLAEVNLNDCSKLQGVHPSILSLNSLCYLRLRGCEALTNLTSNTHLQSLEYLDLTECSRLNKFSVTSENSGFELILSGTAINDELCSSSGRLSKIGSLFLDECKSVKSLPYKLVDLRNLGRLDANGCNKVASNLLSIFDEMRALEVLYLNDCSESFEVPDNISLLSSLRTLSLSRSNIETLPSSIKHLSSLKELNVNRCERLRSLPELPPSILDLSARDCLSLVSLQLPLMREDGEQKEDQTKLCFAFTSCMKLDQQSIKACEAKVVHEISKATCCGAYVEYPGERVPDWFMYRSIRSSVITVDLRSIPQPWDGCFIFCVVILKSPPMAAVDAKCFIDGQYACTYEGGFIYDPLLSDHVVIWYDACSCGELQRKIEEKKRDAHSDTYIPLLQIQFTVAALIRGEIKECGVCPTSALLEYQNYIQQIRLPLHPHPSSDTMQTPSRKRKYHSLLR 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3395g00002 1121 PRINTS Disease resistance protein signature 218 233 - -
Pral3395g00002 1121 PRINTS Disease resistance protein signature 712 728 - -
Pral3395g00002 1121 PRINTS Disease resistance protein signature 295 309 - -
Pral3395g00002 1121 PRINTS Disease resistance protein signature 388 402 - -
Pral3395g00002 1121 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Pral3395g00002 1121 Gene3D - 352 437 IPR042197 -
Pral3395g00002 1121 Gene3D - 14 186 IPR035897 -
Pral3395g00002 1121 SMART till_3 16 155 IPR000157 GO:0007165
Pral3395g00002 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 447 IPR027417 -
Pral3395g00002 1121 SUPERFAMILY L domain-like 501 887 - -
Pral3395g00002 1121 Pfam TIR domain 16 194 IPR000157 GO:0007165
Pral3395g00002 1121 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 785 IPR044974 GO:0006952
Pral3395g00002 1121 Gene3D Ribonuclease Inhibitor 514 738 IPR032675 -
Pral3395g00002 1121 Gene3D Ribonuclease Inhibitor 740 922 IPR032675 -
Pral3395g00002 1121 Gene3D - 187 346 IPR027417 -
Pral3395g00002 1121 Pfam Leucine Rich Repeat 623 642 IPR011713 -
Pral3395g00002 1121 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral3395g00002 1121 MobiDBLite consensus disorder prediction 1099 1121 - -
Pral3395g00002 1121 Pfam NB-ARC domain 203 429 IPR002182 GO:0043531
Pral3395g00002 1121 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3395g00002 Pral-Chr3395 128622 133019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3395g00002 9 862 WRKY Transcription Factor Family AT4G12020 31.640 5.14e-102 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3395g00002 - - pcin:129290874 1086.25