Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3392g00015 ATGGGCTTGCATGTTCGAATCTTTGTCTTGTTGATGATAGCTTTTACAGGAACCTTTTGTACTGGAGATACCGACTTACTTGACGTTGCAGCAATTAATAGTTTATATGTTGCTCTGGGCTCACCGCCTCTTCAAGGTTGGAAAACCACTGGGGGAGATCCGTGTGCAGAATTGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTCAATTAAGTCTCAGAGGCATGAACTTGGGTGGAGAGCTGGGCAGTAATTTAAATTTTCCTTCCATCATTGAGATAGATCTTAGCAACAACCACATCGGAGGACCTATTCCATCCACACTACCCCTTACTTTGAGGAACTTGTCTCTTTCAAGTAACCAGTTAAATGGAAGTATTCCAGATGCCCTCTCCTCTCTAACACAATTGTCAGATTTGTCATTAAGTAATAACCTTCTAGATGGACAAATCCCTGATGTTTTTCAGCAGCTTACTGGCCTGATAAACATAGACCTGTCAGCTAACAAGTTGAGTGGTCAGCTACCCCTCTCACTGGGAAATTTGTCATTGCTTTCAACATTACATTTGCAGAACAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGACCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGGCCAATTCCTCCACAATTGTTGAGTATCCCAAATCTCAGAAAAGATGGAAATCCATTTAATACTACTGTCATCCGATCACCTCCAGCTGCAGCCCCAGGTCCTCTTGCTATGGTCCCATCACCTGCTGAAGCATCTTGGAATGTGGCAAATAGTCCATTTACCTTGGTTGCAGCGATACCTGCAAGTGCTAGGAAGTATTTTGTATCTAAGAATGTTATTTGGATTGTCATTGCTGGGTTCTTGGTGTTTATTGCACTAGGGGTCTGTCTTTTTATATTGTGGTGCTTTAAGAAAAGGCCGGAAAACAAAAATGCTCAAAAAAGTGATGTGGGTTTGGGCCCAGTGTCGTTGCATAAACATCAATACAGTGACCCTTTGGAGAAAGCATCTTTGAAACCAATAAGATCTCTTGGATATGGCGAACAAAATAGAAGAACAAATATGACTCCAGATGTTCAGAATGAACAGGAAATATATATGAACAGAGTATCAGCAAGTTCCAAACTTGCAACATTGCAGCCACCACCATCTAACCTTCCCATCAATCTTGGCGAAGAGGACCTAACCAAGCCAGTTATGCCTACCAAAGTTACTGAAAGACATGTTATGACTAGTTCATTGCATGTTTATACTATTGCATCGCTTCAGCAGTATACAAATAGTTTTTCCCAAGAAAATTATATTGGTGAAGGCACACTGGGTGTCATTTATCGGGCTGAGCTCCCTGATGGAAAGTTGTCAGGACGCCTCCTAACAGCGAATGGTTATGGTGCGTCAGAATTTGAGACTGGGAGTTATACAAAGCAGAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTGTGACAGGTCACGGTCTCGTGGTGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTGCATGATATTGATGCATTAACAAAAATGGTTGACCCCTCCTTAAATGGAGCTTATTCTATGAAGTCCTTATCACGTTTTGCGGACATCATTTCTTCATGTCTACAGCGTGAACCGGAGTTCCGACCAGCAATGACGGAAGTTGTGCAGGATCTCTTACGTATGATCTAG 1752 0.4207 MGLHVRIFVLLMIAFTGTFCTGDTDLLDVAAINSLYVALGSPPLQGWKTTGGDPCAELWQGVACVFSNITQLSLRGMNLGGELGSNLNFPSIIEIDLSNNHIGGPIPSTLPLTLRNLSLSSNQLNGSIPDALSSLTQLSDLSLSNNLLDGQIPDVFQQLTGLINIDLSANKLSGQLPLSLGNLSLLSTLHLQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTVIRSPPAAAPGPLAMVPSPAEASWNVANSPFTLVAAIPASARKYFVSKNVIWIVIAGFLVFIALGVCLFILWCFKKRPENKNAQKSDVGLGPVSLHKHQYSDPLEKASLKPIRSLGYGEQNRRTNMTPDVQNEQEIYMNRVSASSKLATLQPPPSNLPINLGEEDLTKPVMPTKVTERHVMTSSLHVYTIASLQQYTNSFSQENYIGEGTLGVIYRAELPDGKLSGRLLTANGYGASEFETGSYTKQSDVFSFGVVMLELLTGRKSCDRSRSRGEQFLVRWAVPQLHDIDALTKMVDPSLNGAYSMKSLSRFADIISSCLQREPEFRPAMTEVVQDLLRMI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3392g00015 583 Gene3D Ribonuclease Inhibitor 28 244 IPR032675 -
Pral3392g00015 583 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 250 - -
Pral3392g00015 583 Gene3D Transferase(Phosphotransferase) domain 1 472 583 - -
Pral3392g00015 583 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 475 581 IPR046959 -
Pral3392g00015 583 Pfam Protein tyrosine and serine/threonine kinase 482 579 IPR001245 GO:0004672|GO:0006468
Pral3392g00015 583 SUPERFAMILY Protein kinase-like (PK-like) 476 579 IPR011009 -
Pral3392g00015 583 SUPERFAMILY L domain-like 28 233 - -
Pral3392g00015 583 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Pral3392g00015 583 Gene3D Phosphorylase Kinase; domain 1 413 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3392g00015 Pral-Chr3392 285842 308238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3392g00015 465 583 Strubbelig Receptor Gene Family AT4G03390 78.992 2.77e-54 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral3392g00015 PK_Tyr_Ser-Thr 2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3392g00015 - - pvu:PHAVU_002G224200g 514.998