Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3392g00013 ATGGGCTTGCATGTTCGAATCTTTGTCTTGTTGATGATAGCTTTTACAGGAACCTTTTGTACTGGAGATACCGACTTACTTGACGCAATTAATAGTTTATATGTTGCTCTGGGCTCACCGCCTCTTCAAGGTTGGAAAACCACTGGGGGAGATCCGTGTGCAGAATTGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTCAATTAAGTCTCAGAGGCATGAACTTGGGTGGAGAGCTGGGCAGTAATTTAAATTTTCCTTCCATCATTGAGATAGATCTTAGCAACAACCACATCGGAGGACCTATTCCATCCACACTACCCCTTACTTTGAGGAACTTGTCTCTTTCAAGTAACCAGTTAAATGGAAGTATTCCAGATGCCCTCTCCTCTCTAACACAATTGTCAGATTTGTCATTAAGTAATAACCTTCTAGATGGACAAATCCCTGATGTTTTTCAGCAGCTTACTGGCCTGATAAACATAGACCTGTCAGCTAACAAGTTGAGTGGTCAGCTACCCCTCTCACTGGGAAATTTGTCATTGCTTTCAACATTACATTTGCAGAACAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGACCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGGCCAATTCCTCCACAATTGTTGAGTATCCCAAATCTCAGAAAAGATGGAAATCCATTTAATACTACTGTCATCCGATCACCTCCAGCTGCAGCCCCAGGTCCTCTTGCTATGGTCCCATCACCTGCTGAAGCATCTTGGAATGTGGCAAATAGTCCATTTACCTTGGTTGCAGCGATACCTGCAAGTGCTAGGAAGTATTTTGTATCTAAGAATGTTATTTGGATTGTCATTGCTGGGTTCTTGGTGTTTATTGCACTAGGGGTCTGTCTTTTTATATTGTGGTGCTTTAAGAAAAGGCCGGAAAACAAAAATGCTCAAAAAAGTGATGTGGGTTTGGGCCCAGTGTCGTTGCATAAACATCAATACAGTGACCCTTTGGAGAAAGCATCTTTGAAACCAATAAGATCTCTTGGATATGGCGAACAAAATAGAAGAACAAATATGACTCCAGATGTTCAGAATGAACAGGAAATATATATGAACAGAGTATCAGCAAGTTCCAAACTTGCAACATTGCAGCCACCACCATCTAACCTTCCCATCAATCTTGGCGAAGAGGACCTAACCAAGCCAGTTATGCCTACCAAAGTTACTGAAAGACATGTTATGACTAGTTCATTGCATGTTTATACTATTGCATCGCTTCAGCAGTATACAAATAGTTTTTCCCAAGAAAATTATATTGGTGAAGGCACACTGGGTGTCATTTATCGGGCTGAGCTCCCTGATGGAAAGTTGTCAGGACGCCTCCTAACAGCGAATGGTTATGGTGCGTCAGAATTTGAGACTGGGAGTTATACAAAGCAGAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTGTGACAGGTCACGGTCTCGTGGTGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTGCATGATATTGATGCATTAACAAAAATGGTTGACCCCTCCTTAAATGGAGCTTATTCTATGAAGTCCTTATCACGTTTTGCGGACATCATTTCTTCATGTCTACAGCGTGAACCGGAGTTCCGACCAGCAATGACGGAAGTTGTGCAGGATCTCTTACGTATGATCTAG 1746 0.4204 MGLHVRIFVLLMIAFTGTFCTGDTDLLDAINSLYVALGSPPLQGWKTTGGDPCAELWQGVACVFSNITQLSLRGMNLGGELGSNLNFPSIIEIDLSNNHIGGPIPSTLPLTLRNLSLSSNQLNGSIPDALSSLTQLSDLSLSNNLLDGQIPDVFQQLTGLINIDLSANKLSGQLPLSLGNLSLLSTLHLQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTVIRSPPAAAPGPLAMVPSPAEASWNVANSPFTLVAAIPASARKYFVSKNVIWIVIAGFLVFIALGVCLFILWCFKKRPENKNAQKSDVGLGPVSLHKHQYSDPLEKASLKPIRSLGYGEQNRRTNMTPDVQNEQEIYMNRVSASSKLATLQPPPSNLPINLGEEDLTKPVMPTKVTERHVMTSSLHVYTIASLQQYTNSFSQENYIGEGTLGVIYRAELPDGKLSGRLLTANGYGASEFETGSYTKQSDVFSFGVVMLELLTGRKSCDRSRSRGEQFLVRWAVPQLHDIDALTKMVDPSLNGAYSMKSLSRFADIISSCLQREPEFRPAMTEVVQDLLRMI 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3392g00013 581 SUPERFAMILY L domain-like 24 231 - -
Pral3392g00013 581 Pfam Protein tyrosine and serine/threonine kinase 480 577 IPR001245 GO:0004672|GO:0006468
Pral3392g00013 581 Gene3D Phosphorylase Kinase; domain 1 411 469 - -
Pral3392g00013 581 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 23 248 - -
Pral3392g00013 581 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 473 579 IPR046959 -
Pral3392g00013 581 Pfam Leucine rich repeat 111 170 IPR001611 GO:0005515
Pral3392g00013 581 SUPERFAMILY Protein kinase-like (PK-like) 474 577 IPR011009 -
Pral3392g00013 581 Gene3D Transferase(Phosphotransferase) domain 1 470 581 - -
Pral3392g00013 581 Gene3D Ribonuclease Inhibitor 23 242 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3392g00013 Pral-Chr3392 285842 308238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3392g00013 463 581 Strubbelig Receptor Gene Family AT4G03390 78.992 2.57e-54 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral3392g00013 PK_Tyr_Ser-Thr 2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3392g00013 - - pvu:PHAVU_002G224200g 506.908