Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3392g00012 ATGGGCTTGCATGTTCGAATCTTTGTCTTGTTGATGATAGCTTTTACAGGAACCTTTTGTACTGGAGATACCGACTTACTTGACGGTTGGAAAACCACTGGGGGAGATCCGTGTGCAGAATTGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTCAATTAAGTCTCAGAGGCATGAACTTGGGTGGAGAGCTGGGCAGTAATTTAAATTTTCCTTCCATCATTGAGATAGATCTTAGCAACAACCACATCGGAGGACCTATTCCATCCACACTACCCCTTACTTTGAGGAACTTGTCTCTTTCAAGTAACCAGTTAAATGGAAGTATTCCAGATGCCCTCTCCTCTCTAACACAATTGTCAGATTTGTCATTAAGTAATAACCTTCTAGATGGACAAATCCCTGATGTTTTTCAGCAGCTTACTGGCCTGATAAACATAGACCTGTCAGCTAACAAGTTGAGTGGTCAGCTACCCCTCTCACTGGGAAATTTGTCATTGCTTTCAACATTACATTTGCAGAACAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGACCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGGCCAATTCCTCCACAATTGTTGAGTATCCCAAATCTCAGAAAAGATGGAAATCCATTTAATACTACTGTCATCCGATCACCTCCAGCTGCAGCCCCAGGTCCTCTTGCTATGGTCCCATCACCTGCTGAAGCATCTTGGAATGTGGCAAATAGTCCATTTACCTTGGTTGCAGCGATACCTGCAAGTGCTAGGAAGTATTTTGTATCTAAGAATGTTATTTGGATTGTCATTGCTGGGTTCTTGGTGTTTATTGCACTAGGGGTCTGTCTTTTTATATTGTGGTGCTTTAAGAAAAGGCCGGAAAACAAAAATGCTCAAAAAAGTGATGTGGGTTTGGGCCCAGTGTCGTTGCATAAACATCAATACAGTGACCCTTTGGAGAAAGCATCTTTGAAACCAATAAGATCTCTTGGATATGGCGAACAAAATAGAAGAACAAATATGACTCCAGATGTTCAGAATGAACAGGAAATATATATGAACAGAGTATCAGCAAGTTCCAAACTTGCAACATTGCAGCCACCACCATCTAACCTTCCCATCAATCTTGGCGAAGAGGACCTAACCAAGCCAGTTATGCCTACCAAAGTTACTGAAAGACATGTTATGACTAGTTCATTGCATGTTTATACTATTGCATCGCTTCAGCAGTATACAAATAGTTTTTCCCAAGAAAATTATATTGGTGAAGGCACACTGGGTGTCATTTATCGGGCTGAGCTCCCTGATGGAAAGTTGTCAGGACGCCTCCTAACAGCGAATGGTTATGGTGCGTCAGAATTTGAGACTGGGAGTTATACAAAGCAGAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTGTGACAGGTCACGGTCTCGTGGTGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTGCATGATATTGATGCATTAACAAAAATGGTTGACCCCTCCTTAAATGGAGCTTATTCTATGAAGTCCTTATCACGTTTTGCGGACATCATTTCTTCATGTCTACAGCGTGAACCGGAGTTCCGACCAGCAATGACGGAAGTTGTGCAGGATCTCTTACGTATGATCTAG 1701 0.4203 MGLHVRIFVLLMIAFTGTFCTGDTDLLDGWKTTGGDPCAELWQGVACVFSNITQLSLRGMNLGGELGSNLNFPSIIEIDLSNNHIGGPIPSTLPLTLRNLSLSSNQLNGSIPDALSSLTQLSDLSLSNNLLDGQIPDVFQQLTGLINIDLSANKLSGQLPLSLGNLSLLSTLHLQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTVIRSPPAAAPGPLAMVPSPAEASWNVANSPFTLVAAIPASARKYFVSKNVIWIVIAGFLVFIALGVCLFILWCFKKRPENKNAQKSDVGLGPVSLHKHQYSDPLEKASLKPIRSLGYGEQNRRTNMTPDVQNEQEIYMNRVSASSKLATLQPPPSNLPINLGEEDLTKPVMPTKVTERHVMTSSLHVYTIASLQQYTNSFSQENYIGEGTLGVIYRAELPDGKLSGRLLTANGYGASEFETGSYTKQSDVFSFGVVMLELLTGRKSCDRSRSRGEQFLVRWAVPQLHDIDALTKMVDPSLNGAYSMKSLSRFADIISSCLQREPEFRPAMTEVVQDLLRMI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3392g00012 566 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Pral3392g00012 566 SUPERFAMILY L domain-like 30 216 - -
Pral3392g00012 566 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 18 233 - -
Pral3392g00012 566 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 458 564 IPR046959 -
Pral3392g00012 566 Gene3D Phosphorylase Kinase; domain 1 396 452 - -
Pral3392g00012 566 Gene3D Ribonuclease Inhibitor 11 228 IPR032675 -
Pral3392g00012 566 Pfam Protein tyrosine and serine/threonine kinase 465 562 IPR001245 GO:0004672|GO:0006468
Pral3392g00012 566 SUPERFAMILY Protein kinase-like (PK-like) 459 562 IPR011009 -
Pral3392g00012 566 Gene3D Transferase(Phosphotransferase) domain 1 453 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3392g00012 Pral-Chr3392 285842 308238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3392g00012 448 566 Strubbelig Receptor Gene Family AT4G03390 78.992 2.31e-54 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral3392g00012 PK_Tyr_Ser-Thr 2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3392g00012 - - pvu:PHAVU_002G224200g 473.781