Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3390g00011 ATGCAAGGGCAATTTTCAGAGAAATCAGATGTTTTCAGTTTTGGAGTTCTAGTGCTAGAGATTATTAGTGGAAGAAGCAATTGTAGATTGTATGAGATGGAGGGATCTCAAACCCTTTTAGGCTATGTATGGAAGCTATGGAATGAAAACGACCTGGTGTCCATTATTGATTCAGAAATAGAATATCAAGGTTCTTATGAGGATATTTTGCGGTGCATACATATAGGATTACTTTGTGTGCAAGAATTAGCAAAAGAGCGGCCAACTATGGCCAATGTAGTGTCGATGCTTAGTAGTGAGATTGCTAATCTTCCTATTCCAAGGCAACCTGCATATATACTAAATGAGACAGAGTTCAATTTGAAGTCTGCTTCAGAAACACAGGGTTTGCACTCTGCTAACTTTGTTAGCATTACTGACATAAGTGGGAGATAA 435 0.3816 MQGQFSEKSDVFSFGVLVLEIISGRSNCRLYEMEGSQTLLGYVWKLWNENDLVSIIDSEIEYQGSYEDILRCIHIGLLCVQELAKERPTMANVVSMLSSEIANLPIPRQPAYILNETEFNLKSASETQGLHSANFVSITDISGR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3390g00011 144 Pfam Protein tyrosine and serine/threonine kinase 2 97 IPR001245 GO:0004672|GO:0006468
Pral3390g00011 144 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Pral3390g00011 144 SUPERFAMILY Protein kinase-like (PK-like) 3 128 IPR011009 -
Pral3390g00011 144 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3390g00011 Pral-Chr3390 363375 363984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3390g00011 1 144 Receptor kinase-like Gene Family AT4G21410 48.299 5.48e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3390g00011 PK_Tyr_Ser-Thr 1.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3390g00011 - - pcin:129286414 222.246