Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3390g00009 ATGAGATTCTTTTGCAGATATACAATCCTGCTCGCTGTCTTGATCATATTTTGCTGCTCCTGTTTTGACTTTTGCAGTGCCAAAGACACCATCAAATCATCACAACACATTAAGGATCCTGAAACTGTTAGTTCCAATGGAAGTTTTTTCATGTTGGGATTTTTCAGTCCAGAAAATACCACAAATCGCTACGTGGGAATTTGGTACAAGTCCCAGTCCAATATCATATGGGTAGCTAACAGAAACCAACCATTGACGGATTCTTCTGGGACTGGGACTATTGCAATATCTGAGGATGGCAATCTTGTGGTAATAAATGGGGAAAACCACATCATTTGGTCATCAAATGTGTCAAATATTGCCCTCAATACAACTTGTCAGCTTCTAGATTCTGGAAATCTTGTCCTCAAAGATTCCGCAGAAAACATCTTATGGGAAAGTTTTGCACATCCTTCTGACTCATTCCTCCCCCAAATGAAACTTACAAGGAACAAAAGAACAGGTGAGAAACTAAGACTAACATCGTGGAAAAGTTTGTCAGATCCATCCATGGGCAACTTCTTTATCACACTTGAACGTCCAGATATTCCTGAAATATTCATTTGGAATGGAGATCACCCGTATTGGCGAAGTGGTCCATGGAATGGTAGGATCTTTACTGGCATATACTATATGAATGCCCTTTATCTTAAAGGATTTCGTATCATAGAGGATGGAGAAGGAACTATTTATGTGTCTTTTAGTTTTTCTGATGTGACAGAATTCACGTTGTTTGTCTTAGACTTTCAGGGCGTAATATACGAAAAAGATTGGTTTAATGACACAATAGAACCACAAAAAAATCATAGTATTCAAACTTCAGAATGTGATATTTATGGCTTATGTGGATCATTTGGAAGCTGCAATGCAAATAGTTCGCCTATATGCAACTGTTTGAGAGGTTTTGAGCCAAGCAAGAGAAAGGAATGGGATATGCAAAACTGGACTAATGGTTGTGAGAGGAAGACAACTTTGCAGTGTGAGATGTTGAAAAATCGAAGTGCACAAGGCAAACAAGATGGATTTTATAAGTTGCAGATGGTTAAAGTGCCAGATTTTGCAGAACTGTCCTCTGCTTCAGAGGAGACCTGCAGAAGCCAATGCTTGGAGAACTGTACTTGTATAGCATATTCATATAGTCCTGAAATAGGTTGCATGTCTTGGAAGGGAAATCTAATTGATATACAGCAGTTCTCAACAGGTGGACTTGATCTATATGTACGTCTAGCCCATTCAGATCTTGAAAAGGAGACGCATGCCAGAAAAATCATCATCATTACAGTAATAATAGGAACACTTATAATTGCTTTTGGTACATATGTTTTATGGAAAAGGATAGTGAAGCACTCAGAGACAAAATCAAAGAACAAGTGGTTCTTACGATTAAAGAAAGATGAAGAATATTTAGAGAAAACAGAAGACACCATCATCGGACAATTGTCCCGTGTCAAACTACCAGAGGTATTGGCATATGATTTTGAAAAGGTTGCAACTGCTACAAACAACTTTGACCTCTCTAATAAGCTTGGGCAGGGTGGCTTTGGTCCAGTGTACAAGGGGATATTGCAAGACAGTCAGAATATTGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGACTAGAGGAATTCATGAATGAGGTCATTGTCATTTCCAAGCTTCAACACCGTAATCTTGTCAAACTTATTGGCTGCTGCATTGAAGGAGGAGAGAAGATGTTAATCTACGAGTACATGCCAAATAAAAGTTTAGATGCATTTATTTTTGATCCACTAAACAAGAAAGTCCTAGATTGGGGAAAGCGTTTTGACATAATTGGAGGGATAGCTAGAGGAATGCTTTATCTTCATCGAGATTCTAGACTAAAAATTATACATAGAGACCTAAAGGCAAGCAACATACTATTAGATGAGAACTTGAATCCAAAAATATCAGATTTTGGCATGGCAAGAATTTTTCAAGGGAGTGAAGATCAAGCAAACACGAGAAGAGTTGTTGGAACCTATGGTTATATGTCACCGGAGTATGCAATAGAAGGATTATTTTCAGAGAAATCCGATGTGTTTAGTTTTGGAGTTTTACTATTAGAGATTGCAACTGGAAGAAGAAACTCAAGCCTTTCTATCAATGAGGATTCTCTCAGCCTTTTAGGATTGACATGGAAATTATGGAATGAGGAGAATGCTTCAACGCTAATAGATCCTAGAATATATGATAACAACCTGGAGAAAGACATATTAAGATGCATACACATAGGGCTTTTATGCGTGCAAGAGCTTGCAAGAGAGAGGCCAAGTATGAGCACTGTGGTTTCAATGCTTAGCAGTGAGATTGTAAACCTTCCTTCTCCAAAACAACCCGCATTCATCGAATGGCAGAGTTTGCTATGTTCATCATCTAATGAAGAAAGTCAGAGATTGTTTACAAATAACAGTGTTAGCGTTACAGAGATACATGGCAGATAA 2505 0.382 MRFFCRYTILLAVLIIFCCSCFDFCSAKDTIKSSQHIKDPETVSSNGSFFMLGFFSPENTTNRYVGIWYKSQSNIIWVANRNQPLTDSSGTGTIAISEDGNLVVINGENHIIWSSNVSNIALNTTCQLLDSGNLVLKDSAENILWESFAHPSDSFLPQMKLTRNKRTGEKLRLTSWKSLSDPSMGNFFITLERPDIPEIFIWNGDHPYWRSGPWNGRIFTGIYYMNALYLKGFRIIEDGEGTIYVSFSFSDVTEFTLFVLDFQGVIYEKDWFNDTIEPQKNHSIQTSECDIYGLCGSFGSCNANSSPICNCLRGFEPSKRKEWDMQNWTNGCERKTTLQCEMLKNRSAQGKQDGFYKLQMVKVPDFAELSSASEETCRSQCLENCTCIAYSYSPEIGCMSWKGNLIDIQQFSTGGLDLYVRLAHSDLEKETHARKIIIITVIIGTLIIAFGTYVLWKRIVKHSETKSKNKWFLRLKKDEEYLEKTEDTIIGQLSRVKLPEVLAYDFEKVATATNNFDLSNKLGQGGFGPVYKGILQDSQNIAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVKLIGCCIEGGEKMLIYEYMPNKSLDAFIFDPLNKKVLDWGKRFDIIGGIARGMLYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGMARIFQGSEDQANTRRVVGTYGYMSPEYAIEGLFSEKSDVFSFGVLLLEIATGRRNSSLSINEDSLSLLGLTWKLWNEENASTLIDPRIYDNNLEKDILRCIHIGLLCVQELARERPSMSTVVSMLSSEIVNLPSPKQPAFIEWQSLLCSSSNEESQRLFTNNSVSVTEIHGR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3390g00009 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 148 - -
Pral3390g00009 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 182 IPR036426 -
Pral3390g00009 834 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pral3390g00009 834 SUPERFAMILY Protein kinase-like (PK-like) 500 787 IPR011009 -
Pral3390g00009 834 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 482 591 - -
Pral3390g00009 834 CDD PAN_AP_plant 336 423 - -
Pral3390g00009 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pral3390g00009 834 ProSiteProfiles Protein kinase domain profile. 516 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00009 834 FunFam Liguleless narrow1 592 795 - -
Pral3390g00009 834 Pfam D-mannose binding lectin 75 177 IPR001480 -
Pral3390g00009 834 CDD B_lectin 34 151 IPR001480 -
Pral3390g00009 834 SMART serkin_6 516 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00009 834 Gene3D - 24 149 IPR036426 -
Pral3390g00009 834 PIRSF SRK 1 834 IPR024171 GO:0004674
Pral3390g00009 834 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 778 - -
Pral3390g00009 834 Gene3D Phosphorylase Kinase; domain 1 478 591 - -
Pral3390g00009 834 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Pral3390g00009 834 CDD STKc_IRAK 522 787 - -
Pral3390g00009 834 SMART blect_4 34 151 IPR001480 -
Pral3390g00009 834 Gene3D Transferase(Phosphotransferase) domain 1 592 795 - -
Pral3390g00009 834 Pfam Protein tyrosine and serine/threonine kinase 518 786 IPR001245 GO:0004672|GO:0006468
Pral3390g00009 834 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Pral3390g00009 834 SMART ntp_6 350 422 IPR003609 -
Pral3390g00009 834 Pfam Domain of unknown function (DUF3403) 789 834 IPR021820 GO:0004674
Pral3390g00009 834 Pfam PAN-like domain 350 408 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3390g00009 Pral-Chr3390 286601 289996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3390g00009 500 802 Receptor kinase-like Gene Family AT4G23230 58.416 9.02e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3390g00009 PK_Tyr_Ser-Thr 4.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3390g00009 - - pcin:129286414 1425.61