Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3390g00007 ATGGGATTCAGTAAAAAAGCTTGCTTGTTACTAACCTTTTTCGCATATTTGTTGTACTATTTTAGTGTCCTGGTCTGCGCCTTGGACACCATCACACCATCTTTGTTAATCCAAGAACCTGAAAAAGTAAGCTCAAACAATAACATGTTTACGCTGGGATTCTTCAGGCCTCAGAATTCCACAAATCGCTATGTAGGGATTTGGCTCATGTCCAAATCCTCTGTTGTTTGGGTAGCTAACAGAAACAACCCACTAACAGATACATCTGGGATTCTCACAATATCAGAGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAACAAGTTGTTTGGTCAACAAATGTCTCAATTGCATCAAATTCAAGTGCTCAGCTGTTAGATACTGGAAACCTTGTCCTTGTAGATAGAACTACCGGAGTATCCATGTGGCAAAGTTTCCAGCATCCTAGTGATACATTGTTGCAGGACATGAGACTCAGTACTATTCAGAAAACAGGTGAGAAAGTGCAACTTACATCATGGAAAAGTACAGCTGATCCATCCTATGGAGTATTTGCTGGCAGTATTGAACCTCGTAATGTTATTGAAGTGTTCATATGGAAAGAAAATCATCCTTACTGGCGCAGTGGTCCCTGGAATGGCACACACTTTCTTGGGGTGCCTGAGAGTTCATCTACGTTCCTGAATGGGTTTCAGATTAAAGAAGAGAAAGGGAGTTTTGAGATATATTTTCATTACACAGACAAATCATTGTTGCTAACTCTTAGGCTAGATCCTCAAGGTAAAATACAAAAGCAACGTTGGAATCCCCAGACAAATATATGGGAGCTTGAGTGGATAACTGGTGTCACAGAGTGTGATTTTTATGGCACATGTGGCCCATTTGGGATCTGCAATTCGCTAAGCTCACCAATCTGCAGCTGCTTGAGAGGGTTTGAACCAAAAAACAAAGAAGAATGGGAAAGTCAGAACTGGACCAGTGGGTGCATAAGAAGGGAAGCACTTCAGTGTAAGAAAGAAAATAATGGTTCTCAAGTTAACAAGACAGATGGGTTTATAAAGCTGGAGAGGATAAAACCACCAGATCATGCAGAGGCGTTACCTTTCAACTTTGAAGGCACTGTAGATTGTAGAACTTCATGCCTGAAGAATTGCTCTTGTGTAGCTTATGCATTTGCCTCAGGCCTTGGTTGTATGCTTTGGAATGCAGACTTAGTTGACCTGGAGAGATTGTTAGAAGGAGGAGGAGTTGATCTTTACATACGTTTAGCCTACTCCGAACTAGGTAGAGCTAGGAGCATAACAGCACCTATTGTAATATCAGTTCTAATGGGGACAATTCTCATTACTGCTTCTGGATATTTCTCATGGAAGAAAATAACAAAGCGAAAAGGTGAAATGGAGATGCATATTGATGAAAAAAGAAGGATTACAAACCTTAAACACATCAAAATTCAGGAGCTATCATTGTTTGACCATAGAAGGTTGGCAACTGCAACAAACAACTTTGACTTAAAAAATAAACTTGGGCAGGGTGGTTTTGGTCCGGTTTACAAGGGTAAGTTGGAGGATGGACAGGAAATAGCAGTGAAAAGACTATCAAGATCATCAGGACAGGGTATGGAAGAATTTATCAATGAAGTGGAGTTGATTTCTAAACTTCAACACCGAAATCTTGTTAGACTTCTTGGCTATTGCATTGAAAGAGAAGAAGAGATATTGGTTTATGAATACATGCCAAACAAAAGCTTGGATGCATATATCTTTGATCCTCTACGACGGAAATCTTTAGATTGGGGGAAGCGCTTCAGCATAATTGAGGGAATTGCTAGAGGATTGCTTTATCTTCATAAGGATTCAAGATTAAAAATTATACATAGAGATTTGAAGGCAAGTAACATATTGTTGGATGAAAAGATGAACCCAAAGATTTCAGATTTTGGGATGGCTAAACTTTTTGGAGGTAGTGAAGATCAAGCAAATACAGGGAGAATTGTTGGAACATATGGCTATATTTCTCCAGAATATGCAACAGAAGGACTCTATTCCGAGAAATCTGATGTCTTTAGCTTTGGCGTTTTGCTGCTTGAAATTATAAGTGGAAGAAAAAATATTAGTTTTTACGAAGATGCAGAGACATTTACACTACTAGGATATGCATGGAAGCTATGGATTGATGATAACATTACACCTCTAATAGATCCACAAATATATGATCCAGACTTTCAGAAGGATATATTAAGGTGCATACACATAGGTCTTCTATGTGTGCAAGAACTTGCAAAAGATAGGCCCAGCATGGTCTCTATAATGTTAATGCTTCAAAGTGAGATCATGGATATTCCTCCCCCAAGCCAACCTGCATTCATCCTCAGACAGAAAATGCCTCATTCAATCAAGCAAACTCCAAAAAATGATGATTTATATTCTACCAATAAAATGCAACAGAGAGGAGGGGGTATGGGAGAGAAAAGAAACAGGGGGGCGGGGCCGGGAGGGAATAGTACAGGAATTTGTGGGGGAGAGAAGACAAAGCATGGAGAGGGATACCAGAATCTGATTTACGTAAAGCGTACCTCAAGGAAAGCACGTGGTGCTCCTCCGCTGCCGCCGTCGCCACCTGCTACTTCTTCGCCATCTTTGTCGCCTTCTTTTACGTCCTTGTCTGTTGCTGTGAGTCAAACCAGCGTTGCTTTTAAAAATGCTTTCTTGTTTGTCATCACTTACTTTTCTTGTTCATGCTGGGATTCTTCACTGTACATAATTCCACAAATCGCCACTGCGGAATTTAGTTCACGTCTGAATCCATTATTCTTTGGCATGTTCACACTGGGATTCTTCAGTCCGAAGAATTCAACAAACCGCTATGTGGGAATTTGGTTTTTGTCTGAATCCAATGTTGTTTGGGTAGCTAATAGAAACAACCCACTAAGAGATTCTTCGGGAATTCTCACAATATCAGAGAATAATGGCAATCTTGTTGTTTTGGATGGGCAAAAACAGATTTTATGGTCAACAAATGTCTCAAGTATTGCATCAAATTCCAGTGCTCAGCTCTTGGATTCTGGCAACCTTGTACTAGTAGATGGTATTACTGGATCTACGGTGTGGCAGAGTTTCGAACATCCTTGTGACACATTATTACAAGACATGAAACTTAGTACTAATCAACACACAGGTGAGAAAGTGAGGCTTACATCATGGAAAAGTGCATCTGATCCATCCTCTGGAGAATTTTCCTGCGGTCTCGAACCTCGTAATGTTACAGAAATATTCGTGTGGAAAGAAAATCATCCTTATTTTCGAAGTGGTCCCTGGGATGGCGTAAACTTCCTTGGGATACCTAGGACAATTTCATCTAACTCCCAAACTGGGTTCCAATTGAAAGGAGAACAAGGGAGTTTCAACCTATCTTTTTATTCAGACAAGTCCCTCTGGAGTTTTACGTTAAATTCTCAGGGCAAAGTTGAACAACGGCTCTGGAATTCCCAGACCAATGCATGGGATCTTCGGAGGATAATGTATTCTTCAGATTGTGATGTTTATGGCAAATGTGGCCCATTTGGGATTTGTGATTTGCAGAACTCTCCAATTTGTAGCTGCTTGAGAGGGTTTGAACCAAAGAACAAAGAAGAATGGGCAAGGCAGAATTGGACCAATGGGCTCTCTGAATATTCTTCTTTGATCTTTGATACAGGTAAAGGCAGTAGGAAAATGACAACACCTATTATAATATCAGTTTTGATAGGAACAATTCTCATTACTGTGGCTGGATATTTCTTATGGAAAAAGTGCTCAAAGCAGAGAGGGGAAATGCAGATGCAGACTAAAGAAAAGAGGCAGATTATGTCCTTGAAGCAAGTTCATATTCCAGAGCTATTATTGTTTGATTTGAAACAGTTGGAAACTGCAACAAACAACTTTGACATAGTAAATAAACTTGGGCAAGGTGGCTTTGGTCCAGTTTACAAGGGTACATTGGAAGATGGACAGGAAATAGCAGTAAAAAGATTGTCAAGATCATCTGGACAGGGCATGGAAGAATTTATAAATGAAGTGGAATTGATTTCCAAGCTTCAACACCGAAACCTTGTTAGACTTCTTGGCTGTTGCATTGAAGGAGAAGAGATATTGGTTTATGAGTACATGCCAAACAAAAGTTTGGATGCCTATATATTTGATCCACTACAACAAAAATCCTTTGATTGGGAAAAGCGCTTTAACATAATTGAGGGAATAGCCAGAGGATTGCTTTATCTTCACAGAGATTCAAGATTAAGAATTATACACAGAGATTTGAAAGCAAGTAACATATTATTGGATAAAGAAATGAATCCAAAGATATCAGATTTTGGGATGGCTAAATTGTTTAGAGGCAATGAAGATCAGGCAAATACAGAAAGAATCGTTGGAACATATGGCTACATTTCTCCCGAATATGCAACTGAAGGGCTCTATTCAGAGAAATCTGATGTTTTTAGCTTTGGTGTTTTGTTACTAGAAATTATTAGTGGAAGAAAAAACACTAGCTTTTATGCAGGGGCAGCATCTTTGACACTTTTAGGATTTGCATGGAAATTATGGGTCGATGGCAATATTATACCTCTAATAGATCCGCAGATATATGATCTGAGCTTTCACAATGATATATTGAGGTGCATACATATAGGTCTTTTGTGTGTGCAAGAACTTGCAAAAGATAGACCTACTATGGCATCTATAATGTCAATGCTTCAAAGTGAGATGATGGATCTTCCTTCTCCAAGCCGACCTGCATTCATCTTCAGGCAAGCTATGTCTTATGCAGCAGAGCAGGCTTTAGACAATAATGAGTTATGTTCCATAAATATAGTAACCATTTCAAATTGTAAGGGGAGATAG 4881 0.3936 MGFSKKACLLLTFFAYLLYYFSVLVCALDTITPSLLIQEPEKVSSNNNMFTLGFFRPQNSTNRYVGIWLMSKSSVVWVANRNNPLTDTSGILTISENGNLVVLNGQKQVVWSTNVSIASNSSAQLLDTGNLVLVDRTTGVSMWQSFQHPSDTLLQDMRLSTIQKTGEKVQLTSWKSTADPSYGVFAGSIEPRNVIEVFIWKENHPYWRSGPWNGTHFLGVPESSSTFLNGFQIKEEKGSFEIYFHYTDKSLLLTLRLDPQGKIQKQRWNPQTNIWELEWITGVTECDFYGTCGPFGICNSLSSPICSCLRGFEPKNKEEWESQNWTSGCIRREALQCKKENNGSQVNKTDGFIKLERIKPPDHAEALPFNFEGTVDCRTSCLKNCSCVAYAFASGLGCMLWNADLVDLERLLEGGGVDLYIRLAYSELGRARSITAPIVISVLMGTILITASGYFSWKKITKRKGEMEMHIDEKRRITNLKHIKIQELSLFDHRRLATATNNFDLKNKLGQGGFGPVYKGKLEDGQEIAVKRLSRSSGQGMEEFINEVELISKLQHRNLVRLLGYCIEREEEILVYEYMPNKSLDAYIFDPLRRKSLDWGKRFSIIEGIARGLLYLHKDSRLKIIHRDLKASNILLDEKMNPKISDFGMAKLFGGSEDQANTGRIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNISFYEDAETFTLLGYAWKLWIDDNITPLIDPQIYDPDFQKDILRCIHIGLLCVQELAKDRPSMVSIMLMLQSEIMDIPPPSQPAFILRQKMPHSIKQTPKNDDLYSTNKMQQRGGGMGEKRNRGAGPGGNSTGICGGEKTKHGEGYQNLIYVKRTSRKARGAPPLPPSPPATSSPSLSPSFTSLSVAVSQTSVAFKNAFLFVITYFSCSCWDSSLYIIPQIATAEFSSRLNPLFFGMFTLGFFSPKNSTNRYVGIWFLSESNVVWVANRNNPLRDSSGILTISENNGNLVVLDGQKQILWSTNVSSIASNSSAQLLDSGNLVLVDGITGSTVWQSFEHPCDTLLQDMKLSTNQHTGEKVRLTSWKSASDPSSGEFSCGLEPRNVTEIFVWKENHPYFRSGPWDGVNFLGIPRTISSNSQTGFQLKGEQGSFNLSFYSDKSLWSFTLNSQGKVEQRLWNSQTNAWDLRRIMYSSDCDVYGKCGPFGICDLQNSPICSCLRGFEPKNKEEWARQNWTNGLSEYSSLIFDTGKGSRKMTTPIIISVLIGTILITVAGYFLWKKCSKQRGEMQMQTKEKRQIMSLKQVHIPELLLFDLKQLETATNNFDIVNKLGQGGFGPVYKGTLEDGQEIAVKRLSRSSGQGMEEFINEVELISKLQHRNLVRLLGCCIEGEEILVYEYMPNKSLDAYIFDPLQQKSFDWEKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDKEMNPKISDFGMAKLFRGNEDQANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYAGAASLTLLGFAWKLWVDGNIIPLIDPQIYDLSFHNDILRCIHIGLLCVQELAKDRPTMASIMSMLQSEMMDLPSPSRPAFIFRQAMSYAAEQALDNNELCSINIVTISNCKGR 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3390g00007 1626 Gene3D - 930 1106 - -
Pral3390g00007 1626 CDD PAN_AP_plant 335 424 - -
Pral3390g00007 1626 ProSiteProfiles Bulb-type lectin domain profile. 922 1040 IPR001480 -
Pral3390g00007 1626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 578 - -
Pral3390g00007 1626 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Pral3390g00007 1626 Gene3D Transferase(Phosphotransferase) domain 1 1383 1586 - -
Pral3390g00007 1626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Pral3390g00007 1626 SMART ntp_6 347 423 IPR003609 -
Pral3390g00007 1626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Pral3390g00007 1626 CDD STKc_IRAK 1314 1579 - -
Pral3390g00007 1626 CDD B_lectin 44 149 IPR001480 -
Pral3390g00007 1626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1271 1382 - -
Pral3390g00007 1626 CDD EGF_CA 285 316 - -
Pral3390g00007 1626 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 214 IPR036426 -
Pral3390g00007 1626 SUPERFAMILY Protein kinase-like (PK-like) 488 799 IPR011009 -
Pral3390g00007 1626 Gene3D Phosphorylase Kinase; domain 1 1266 1382 - -
Pral3390g00007 1626 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
Pral3390g00007 1626 MobiDBLite consensus disorder prediction 800 842 - -
Pral3390g00007 1626 MobiDBLite consensus disorder prediction 861 880 - -
Pral3390g00007 1626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 938 1040 - -
Pral3390g00007 1626 FunFam Os04g0303100 protein 959 1100 - -
Pral3390g00007 1626 CDD B_lectin 938 1043 IPR001480 -
Pral3390g00007 1626 Pfam PAN-like domain 347 408 IPR003609 -
Pral3390g00007 1626 SUPERFAMILY Protein kinase-like (PK-like) 1292 1599 IPR011009 -
Pral3390g00007 1626 Pfam Protein tyrosine and serine/threonine kinase 505 714 IPR001245 GO:0004672|GO:0006468
Pral3390g00007 1626 Pfam Protein tyrosine and serine/threonine kinase 1310 1575 IPR001245 GO:0004672|GO:0006468
Pral3390g00007 1626 MobiDBLite consensus disorder prediction 803 817 - -
Pral3390g00007 1626 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Pral3390g00007 1626 Pfam S-locus glycoprotein domain 1101 1209 IPR000858 GO:0048544
Pral3390g00007 1626 FunFam Os04g0303100 protein 67 206 - -
Pral3390g00007 1626 ProSiteProfiles Bulb-type lectin domain profile. 28 146 IPR001480 -
Pral3390g00007 1626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1383 1586 - -
Pral3390g00007 1626 SMART serkin_6 1308 1583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00007 1626 SMART serkin_6 503 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00007 1626 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 766 - -
Pral3390g00007 1626 ProSiteProfiles PAN/Apple domain profile. 337 424 IPR003609 -
Pral3390g00007 1626 Gene3D - 23 147 IPR036426 -
Pral3390g00007 1626 CDD STKc_IRAK 509 775 - -
Pral3390g00007 1626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1428 1440 IPR008271 GO:0004672|GO:0006468
Pral3390g00007 1626 Pfam D-mannose binding lectin 967 1069 IPR001480 -
Pral3390g00007 1626 Pfam D-mannose binding lectin 75 175 IPR001480 -
Pral3390g00007 1626 SUPERFAMILY alpha-D-mannose-specific plant lectins 957 1108 IPR036426 -
Pral3390g00007 1626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 146 - -
Pral3390g00007 1626 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00007 1626 SMART blect_4 34 149 IPR001480 -
Pral3390g00007 1626 SMART blect_4 916 1043 IPR001480 -
Pral3390g00007 1626 ProSiteProfiles Protein kinase domain profile. 1308 1583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3390g00007 Pral-Chr3390 240372 256930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3390g00007 426 792 Receptor kinase-like Gene Family AT3G45860 52.162 3.82e-113 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3390g00007 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3390g00007 - - vri:117923174 1184.47