Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3390g00003 ATGTTCTTCATGAGATTCGATAAAAAAGCTTGGTTTTTACTTGCTTTATTCCTTATATTTTCGTTCTCTTCTACTCTTATGGTCTGTGCCTTGGATTCCATTACATCTTCTCTGTTGATCCAAGAACCTGAAACAGTGAGCTCAAGCAATAACATGTTCACGCTGGGATTCTTCAGTCCTGAAAATTCCACCAATCGTTACGTAGGAATTTGGTACATGACCAAATCCTCTATTGTTTGGGTTGCTAACAAAAACAACCCAATACCAGATTCTTCTGGGATTCTCACAATATCAGAAAATGGCAATCTTGTCGTTTTGGATGGGCAAAAGCAGGTTGTTTGGTCAACAAATGTCTCCCATATTGCATCAAATTCCAGTGCTCAACTCTTAGATTCTGGCAACCTCGTCCTTGCAGATAGAAGTTCAGGGGCATATAGGTGGCAGAGCTTCCTACATCCTAGTAATACATTATTACAAGGCATGAAATTGATTGCTTACAGAAAAACAGGCAAGAAAGTGAAAATTACATCATGGAAAAGTCCATCTGATCCATCTGATGGAATATTTTCTTGTGCTCTTGAAATCCGTAACGTGACTGAAATATTCCTGAGGGAAGGAACTCGTCCTAGATGGCGCAGTGGTCCTTGGAATGGCTTAGACTTTCTTGGGATAACTAGGGTAATTTCAACTAACAACCAAAATGGGATTCGGATGGAAGAAGATGAAGACAGTTCTAGATTATCTTTTTATATATACAATGTTATCTGGGCTTATACTTTGGTTCCTCAAGGTAAATTAGAGCGAAGACGTTGGAATCCCCAGACACATACATGGGAACTTTTGAGGTCATTAGGATCTTCAGAGTGTGATGCTTATGGCAAATGTGGCCAATTTGGGATTTGCGATTCGCAGAGCTCCCCAATTTGTAGCTGCCTGAGAGGCTTTGAACCAAAGAACAAAGAAGAATGGGGAAGGCAGAATTGGACCAGTGGGTGTGTGAGAAGAGTAGCACTTCAGTGTGAAAGAAGCACAAATGATTCTCAAGCTGGCAAAATAGATGGGTTTTTTATGGTGGAGAAAGTGAAAGTTCCAGATGATGCTCAGGTGTCAGCTACTTATGATGCGGATGCTGCAGATTGTCAAACTTCATGCCTCAAGAATTGCTCTTGTAAAGCTTATGCCCTTGAAAGAAACCTTGGCTGTATGATTTGGACTGCTGACTTAGTTGACATACAAAGCTTCTCATATGGAGGACTCGACATTTACATACGTTTAGCCTACTCAGAACTAGGCACGGGCAGGAAGAAAATGACGACACCTATTATAATATCAGTTTTGGTAGGAACAATTCTCATTACTGCATCTGCATATTTCTTGTGGAAAAAACGCTCAAAGAGAAAAGGAGAAATGCAGACTCATGACACTAGGATTATGGCTTTGAAGCAAGTCCATATTCCAGAGCTATTATTGTTTGATTATACAAAGCTAGCTACTGCAACAAGAAACTTTGACATAGCTAATAAACTTGGACAGGGTGGGTTCGGTCCAGTTTACCAGGGAAAGTTGGAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCAAAATTGTCTAGACAGGGTATGGAAGAATTTATAAATGAAGTGGAGTTGATTTCTGGGCTTCAACACCGAAACCTTGTTAAACTTCTTGGATGTTGCGTTGAAGAAGAACAAATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATTTATATATCTTCGATCCAAAGCACCAAAAAAAATTTTATTGGGGAAAGCGCTTCAACATAATTGAGGGAATAGCTAGAGGATTGCTTTATCTTCACAGAGATTCAAGATTAAAAATTATACATAGAGATTTGAAGGCAAGTAACATATTATTAGATGAAGAGATGAATCCAAAAATATCAGATTTTGGAATGGCTAAACTTTATGGAGGCAATGCTGATCATGCAAATACTGAAAGAATTGTCGGAACATATGGCTACATTTCTCCCGAATATGCAACCGAAGGACTCTATTCAGAGAAATCTGATGTTTTTAGCTTTGGTGTTCTGTTACTAGAAATTATTAGTGGAAGGAAAAACACTAGTTTCAATGAAGATGCAGAATCTTTTACACTTTTAGGATTGGTAAGCCTCTTCTTTCTTGGAAAAACACTAAAATGCCTAGTGCTATTGAATGTAACATCAAATTAA 2220 0.3838 MFFMRFDKKAWFLLALFLIFSFSSTLMVCALDSITSSLLIQEPETVSSSNNMFTLGFFSPENSTNRYVGIWYMTKSSIVWVANKNNPIPDSSGILTISENGNLVVLDGQKQVVWSTNVSHIASNSSAQLLDSGNLVLADRSSGAYRWQSFLHPSNTLLQGMKLIAYRKTGKKVKITSWKSPSDPSDGIFSCALEIRNVTEIFLREGTRPRWRSGPWNGLDFLGITRVISTNNQNGIRMEEDEDSSRLSFYIYNVIWAYTLVPQGKLERRRWNPQTHTWELLRSLGSSECDAYGKCGQFGICDSQSSPICSCLRGFEPKNKEEWGRQNWTSGCVRRVALQCERSTNDSQAGKIDGFFMVEKVKVPDDAQVSATYDADAADCQTSCLKNCSCKAYALERNLGCMIWTADLVDIQSFSYGGLDIYIRLAYSELGTGRKKMTTPIIISVLVGTILITASAYFLWKKRSKRKGEMQTHDTRIMALKQVHIPELLLFDYTKLATATRNFDIANKLGQGGFGPVYQGKLEDGKEIAVKRLSKLSRQGMEEFINEVELISGLQHRNLVKLLGCCVEEEQILVYEYMPNKSLDLYIFDPKHQKKFYWGKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMAKLYGGNADHANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFNEDAESFTLLGLVSLFFLGKTLKCLVLLNVTSN 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3390g00003 739 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 218 IPR036426 -
Pral3390g00003 739 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Pral3390g00003 739 Pfam Protein tyrosine and serine/threonine kinase 505 702 IPR001245 GO:0004672|GO:0006468
Pral3390g00003 739 FunFam Lectin-domain containing receptor kinase A4.3 578 731 - -
Pral3390g00003 739 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 150 - -
Pral3390g00003 739 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pral3390g00003 739 Pfam PAN-like domain 351 411 IPR003609 -
Pral3390g00003 739 CDD EGF_CA 288 319 - -
Pral3390g00003 739 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Pral3390g00003 739 SUPERFAMILY Protein kinase-like (PK-like) 490 705 IPR011009 -
Pral3390g00003 739 Pfam D-mannose binding lectin 78 179 IPR001480 -
Pral3390g00003 739 CDD PAN_AP_plant 336 426 - -
Pral3390g00003 739 SMART blect_4 37 153 IPR001480 -
Pral3390g00003 739 ProSiteProfiles PAN/Apple domain profile. 340 426 IPR003609 -
Pral3390g00003 739 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 719 - -
Pral3390g00003 739 SMART serkin_6 503 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00003 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pral3390g00003 739 Gene3D - 27 150 IPR036426 -
Pral3390g00003 739 SMART ntp_6 350 425 IPR003609 -
Pral3390g00003 739 Gene3D Transferase(Phosphotransferase) domain 1 578 730 - -
Pral3390g00003 739 CDD B_lectin 44 153 IPR001480 -
Pral3390g00003 739 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Pral3390g00003 739 ProSiteProfiles Protein kinase domain profile. 503 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00003 739 PIRSF SRK 4 732 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3390g00003 Pral-Chr3390 58163 62072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3390g00003 428 709 Receptor kinase-like Gene Family AT4G05200 54.386 1.93e-94 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3390g00003 PK_Tyr_Ser-Thr 4.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3390g00003 - - pcin:129286407 906.36