Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3390g00002 ATGTTCTTCATGAGATTCGATAAAAAAGCTTGGTTTTTACTTGCTTTATTCCTTATATTTTCGTTCTCTTCTACTCTTATGGTCTGTGCCTTGGATTCCATTACATCTTCTCTGTTGATCCAAGAACCTGAAACAGTGAGCTCAAGCAATAACATGTTCACGCTGGGATTCTTCAGTCCTGAAAATTCCACCAATCGTTACGTAGGAATTTGGTACATGACCAAATCCTCTATTGTTTGGGTTGCTAACAAAAACAACCCAATACCAGATTCTTCTGGGATTCTCACAATATCAGAAAATGGCAATCTTGTCGTTTTGGATGGGCAAAAGCAGGTTGTTTGGTCAACAAATGTCTCCCATATTGCATCAAATTCCAGTGCTCAACTCTTAGATTCTGGCAACCTCGTCCTTGCAGATAGAAGTTCAGGGGCATATAGGTGGCAGAGCTTCCTACATCCTAGTAATACATTATTACAAGGCATGAAATTGATTGCTTACAGAAAAACAGGCAAGAAAGTGAAAATTACATCATGGAAAAGTCCATCTGATCCATCTGATGGAATATTTTCTTGTGCTCTTGAAATCCGTAACGTGACTGAAATATTCCTGAGGGAAGGAACTCGTCCTAGATGGCGCAGTGGTCCTTGGAATGGCTTAGACTTTCTTGGGATAACTAGGGTAATTTCAACTAACAACCAAAATGGGATTCGGATGGAAGAAGATGAAGACAGTTCTAGATTATCTTTTTATATATACAATGTTATCTGGGCTTATACTTTGGTTCCTCAAGGTAAATTAGAGCGAAGACGTTGGAATCCCCAGACACATACATGGGAACTTTTGAGGTCATTAGGATCTTCAGAGTGTGATGCTTATGGCAAATGTGGCCAATTTGGGATTTGCGATTCGCAGAGCTCCCCAATTTGTAGCTGCCTGAGAGGCTTTGAACCAAAGAACAAAGAAGAATGGGGAAGGCAGAATTGGACCAGTGGGTGTGTGAGAAGAGTAGCACTTCAGTGTGAAAGAAGCACAAATGATTCTCAAGCTGGCAAAATAGATGGGTTTTTTATGGTGGAGAAAGTGAAAGTTCCAGATGATGCTCAGGTGTCAGCTACTTATGATGCGGATGCTGCAGATTGTCAAACTTCATGCCTCAAGAATTGCTCTTGTAAAGCTTATGCCCTTGAAAGAAACCTTGGCTGTATGATTTGGACTGCTGACTTAGTTGACATACAAAGCTTCTCATATGGAGGACTCGACATTTACATACGTTTAGCCTACTCAGAACTAGGCACGGGCAGGAAGAAAATGACGACACCTATTATAATATCAGTTTTGGTAGGAACAATTCTCATTACTGCATCTGCATATTTCTTGTGGAAAAAACGCTCAAAGAGAAAAGGAGAAATGCAGACTCATGACACTAGGATTATGGCTTTGAAGCAAGTCCATATTCCAGAGCTATTATTGTTTGATTATACAAAGCTAGCTACTGCAACAAGAAACTTTGACATAGCTAATAAACTTGGACAGGGTGGGTTCGGTCCAGTTTACCAGGGAAAGTTGGAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCAAAATTGTCTAGACAGGGTATGGAAGAATTTATAAATGAAGTGGAGTTGATTTCTGGGCTTCAACACCGAAACCTTGTTAAACTTCTTGGATGTTGCGTTGAAGAAGAACAAATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATTTATATATCTTCGATCCAAAGCACCAAAAAAAATTTTATTGGGGAAAGCGCTTCAACATAATTGAGGGAATAGCTAGAGGATTGCTTTATCTTCACAGAGATTCAAGATTAAAAATTATACATAGAGATTTGAAGGCAAGTAACATATTATTAGATGAAGAGATGAATCCAAAAATATCAGATTTTGGAATGGCTAAACTTTATGGAGGCAATGCTGATCATGCAAATACTGAAAGAATTGTCGGAACATAG 2004 0.3887 MFFMRFDKKAWFLLALFLIFSFSSTLMVCALDSITSSLLIQEPETVSSSNNMFTLGFFSPENSTNRYVGIWYMTKSSIVWVANKNNPIPDSSGILTISENGNLVVLDGQKQVVWSTNVSHIASNSSAQLLDSGNLVLADRSSGAYRWQSFLHPSNTLLQGMKLIAYRKTGKKVKITSWKSPSDPSDGIFSCALEIRNVTEIFLREGTRPRWRSGPWNGLDFLGITRVISTNNQNGIRMEEDEDSSRLSFYIYNVIWAYTLVPQGKLERRRWNPQTHTWELLRSLGSSECDAYGKCGQFGICDSQSSPICSCLRGFEPKNKEEWGRQNWTSGCVRRVALQCERSTNDSQAGKIDGFFMVEKVKVPDDAQVSATYDADAADCQTSCLKNCSCKAYALERNLGCMIWTADLVDIQSFSYGGLDIYIRLAYSELGTGRKKMTTPIIISVLVGTILITASAYFLWKKRSKRKGEMQTHDTRIMALKQVHIPELLLFDYTKLATATRNFDIANKLGQGGFGPVYQGKLEDGKEIAVKRLSKLSRQGMEEFINEVELISGLQHRNLVKLLGCCVEEEQILVYEYMPNKSLDLYIFDPKHQKKFYWGKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMAKLYGGNADHANTERIVGT 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3390g00002 667 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pral3390g00002 667 Pfam D-mannose binding lectin 78 179 IPR001480 -
Pral3390g00002 667 ProSiteProfiles Protein kinase domain profile. 503 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00002 667 Gene3D - 27 150 IPR036426 -
Pral3390g00002 667 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Pral3390g00002 667 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 578 667 - -
Pral3390g00002 667 Gene3D Transferase(Phosphotransferase) domain 1 578 667 - -
Pral3390g00002 667 CDD EGF_CA 288 319 - -
Pral3390g00002 667 SUPERFAMILY Protein kinase-like (PK-like) 490 667 IPR011009 -
Pral3390g00002 667 Pfam Protein kinase domain 505 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00002 667 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Pral3390g00002 667 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 150 - -
Pral3390g00002 667 CDD PAN_AP_plant 336 426 - -
Pral3390g00002 667 SMART blect_4 37 153 IPR001480 -
Pral3390g00002 667 ProSiteProfiles PAN/Apple domain profile. 340 426 IPR003609 -
Pral3390g00002 667 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 218 IPR036426 -
Pral3390g00002 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pral3390g00002 667 SMART ntp_6 350 425 IPR003609 -
Pral3390g00002 667 SMART serkin_6 503 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00002 667 CDD B_lectin 44 153 IPR001480 -
Pral3390g00002 667 Pfam PAN-like domain 351 411 IPR003609 -
Pral3390g00002 667 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 657 - -
Pral3390g00002 667 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3390g00002 Pral-Chr3390 58074 62072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3390g00002 437 667 Receptor kinase-like Gene Family AT4G23190 50.862 1.08e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3390g00002 Pkinase 7.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3390g00002 - - qsa:O6P43_012540 736.873