Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3390g00001 ATGTTCTTCATGAGATTCGATAAAAAAGCTTGGTTTTTACTTGCTTTATTCCTTATATTTTCGTTCTCTTCTACTCTTATGGTCTGTGCCTTGGATTCCATTACATCTTCTCTGTTGATCCAAGAACCTGAAACAGTGAGCTCAAGCAATAACATGTTCACGCTGGGATTCTTCAGTCCTGAAAATTCCACCAATCGTTACGTAGGAATTTGGTACATGACCAAATCCTCTATTGTTTGGGTTGCTAACAAAAACAACCCAATACCAGATTCTTCTGGGATTCTCACAATATCAGAAAATGGCAATCTTGTCGTTTTGGATGGGCAAAAGCAGGTTGTTTGGTCAACAAATGTCTCCCATATTGCATCAAATTCCAGTGCTCAACTCTTAGATTCTGGCAACCTCGTCCTTGCAGATAGAAGTTCAGGGGCATATAGGTGGCAGAGCTTCCTACATCCTAGTAATACATTATTACAAGGCATGAAATTGATTGCTTACAGAAAAACAGGCAAGAAAGTGAAAATTACATCATGGAAAAGTCCATCTGATCCATCTGATGGAATATTTTCTTGTGCTCTTGAAATCCGTAACGTGACTGAAATATTCCTGAGGGAAGGAACTCGTCCTAGATGGCGCAGTGGTCCTTGGAATGGCTTAGACTTTCTTGGGATAACTAGGGTAATTTCAACTAACAACCAAAATGGGATTCGGATGGAAGAAGATGAAGACAGTTCTAGATTATCTTTTTATATATACAATGTTATCTGGGCTTATACTTTGGTTCCTCAAGGTAAATTAGAGCGAAGACGTTGGAATCCCCAGACACATACATGGGAACTTTTGAGGTCATTAGGATCTTCAGAGTGTGATGCTTATGGCAAATGTGGCCAATTTGGGATTTGCGATTCGCAGAGCTCCCCAATTTGTAGCTGCCTGAGAGGCTTTGAACCAAAGAACAAAGAAGAATGGGGAAGGCAGAATTGGACCAGTGGGTGTGTGAGAAGAGTAGCACTTCAGTGTGAAAGAAGCACAAATGATTCTCAAGCTGGCAAAATAGATGGGTTTTTTATGGTGGAGAAAGTGAAAGTTCCAGATGATGCTCAGGTGTCAGCTACTTATGATGCGGATGCTGCAGATTGTCAAACTTCATGCCTCAAGAATTGCTCTTGTAAAGCTTATGCCCTTGAAAGAAACCTTGGCTGTATGATTTGGACTGCTGACTTAGTTGACATACAAAGCTTCTCATATGGAGGACTCGACATTTACATACGTTTAGCCTACTCAGAACTAGGCACGGGCAGGAAGAAAATGACGACACCTATTATAATATCAGTTTTGGTAGGAACAATTCTCATTACTGCATCTGCATATTTCTTGTGGAAAAAACGCTCAAAGAGAAAAGGAGAAATGCAGACTCATGACACTAGGATTATGGCTTTGAAGCAAGTCCATATTCCAGAGCTATTATTGTTTGATTATACAAAGCTAGCTACTGCAACAAGAAACTTTGACATAGCTAATAAACTTGGACAGGGTGGGTTCGGTCCAGTTTACCAGGGAAAGTTGGAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCAAAATTGTCTAGACAGGGTATGGAAGAATTTATAAATGAAGTGGAGTTGATTTCTGGGCTTCAACACCGAAACCTTGTTAAACTTCTTGGATGTTGCGTTGAAGAAGAACAAATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATTTATATATCTTCGGCATGGAAATTATGGATGGATGCCAATATTACACCTCTGATAGATCCACATATATATGA 1824 0.3958 MFFMRFDKKAWFLLALFLIFSFSSTLMVCALDSITSSLLIQEPETVSSSNNMFTLGFFSPENSTNRYVGIWYMTKSSIVWVANKNNPIPDSSGILTISENGNLVVLDGQKQVVWSTNVSHIASNSSAQLLDSGNLVLADRSSGAYRWQSFLHPSNTLLQGMKLIAYRKTGKKVKITSWKSPSDPSDGIFSCALEIRNVTEIFLREGTRPRWRSGPWNGLDFLGITRVISTNNQNGIRMEEDEDSSRLSFYIYNVIWAYTLVPQGKLERRRWNPQTHTWELLRSLGSSECDAYGKCGQFGICDSQSSPICSCLRGFEPKNKEEWGRQNWTSGCVRRVALQCERSTNDSQAGKIDGFFMVEKVKVPDDAQVSATYDADAADCQTSCLKNCSCKAYALERNLGCMIWTADLVDIQSFSYGGLDIYIRLAYSELGTGRKKMTTPIIISVLVGTILITASAYFLWKKRSKRKGEMQTHDTRIMALKQVHIPELLLFDYTKLATATRNFDIANKLGQGGFGPVYQGKLEDGKEIAVKRLSKLSRQGMEEFINEVELISGLQHRNLVKLLGCCVEEEQILVYEYMPNKSLDLYIFGMEIMDGCQYYTSDRSTYI 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3390g00001 607 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Pral3390g00001 607 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pral3390g00001 607 Pfam PAN-like domain 351 411 IPR003609 -
Pral3390g00001 607 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Pral3390g00001 607 ProSiteProfiles Protein kinase domain profile. 503 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3390g00001 607 CDD PAN_AP_plant 336 426 - -
Pral3390g00001 607 SMART blect_4 37 153 IPR001480 -
Pral3390g00001 607 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 218 IPR036426 -
Pral3390g00001 607 ProSiteProfiles PAN/Apple domain profile. 340 426 IPR003609 -
Pral3390g00001 607 SUPERFAMILY Protein kinase-like (PK-like) 490 590 IPR011009 -
Pral3390g00001 607 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Pral3390g00001 607 Pfam Protein tyrosine and serine/threonine kinase 505 587 IPR001245 GO:0004672|GO:0006468
Pral3390g00001 607 SMART ntp_6 350 425 IPR003609 -
Pral3390g00001 607 CDD B_lectin 44 153 IPR001480 -
Pral3390g00001 607 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 587 - -
Pral3390g00001 607 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 150 - -
Pral3390g00001 607 Gene3D - 27 150 IPR036426 -
Pral3390g00001 607 Pfam D-mannose binding lectin 78 179 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3390g00001 Pral-Chr3390 58004 62072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3390g00001 435 588 Receptor kinase-like Gene Family AT4G23320 49.032 2.37e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3390g00001 S_locus_glycop 4.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3390g00001 - - qsa:O6P43_012540 621.698