Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3389g00001 ATGGCTTTTGAGCTTCACAGGCTCGATGAATTGGCACCTTCTGTGGAGACCTGGAAAGTTGTGGTGAAGGTCGACAGGGTGTTCACTAGGACTGAGTATGATGTTACTGAGAAGGACTTGGGATATCCGAAGAAGCTAATCTCTCTAGATATGATAGTGTTTGACGAACAGGTATTGCATCTATGGGGAGATATGGTACGGTGTGTTCTTTTCGGTGACTCTGCTAATGAGGCATGGAAGAGTTATCTGCCTTTGAAAAGAATGCATAAACTTGTCACTCTGATCAACTATGCAGTGGTGAATAGGCAGCACGGGAAGTTTTGCCTCAAGAACTATGTGAATGCAACAAAGGAAGTCAATGACTCAACTGACAGATGGAGAATTACAGTTCGTGTGATCAGGAGGTGGAATGTCTACAAGAAGGAGTCTCCTACTGAGGTTTTTTATGTGTCCATGCTACTGATAGACGAAGAGGGGACAAGAATCCAAGCTTCTATCATGAACAAAAACCTATTTGATCGTTTTAGTGCCATGGCAGTGGAAGGGATAACTTATTTTATGGCTAATTTCGTCGTCTCTCCAAATAATAAGGAGTACAGGGCAACAAACCATGCTTTCAAACTGACACTAGGTACTTACACATATGTGAAGGAAGTACTTGCCCAAATACCTGAATACTCTTATCATTTCTTCCCTATTCATGACATAATTAAGATGAAGGAGAGCAACCATGTTGACTATCTTATTGATGTCATTGGATTCGTTGCATCAATTGGGCATCTAGAGGAGTACAAGTCTAACAATGAGATCAAGAACAAATTGCGATTGTTGCTGGTAGATGAGCTTGGCAATACTGTGGGTTGCGTTCTTTATGATGACTGTGCAACCAATGTCTGCATGATGGATATTAGCACCATGCAATCTCCTGTTGTGATGATTATGCAGCTTGGAAGGATTGGATTTGATGATGATGGTATGGCTGAGATTTGCAGCTCATACCATGCCACCCAGATTTCATGCAATCCAAAGTTTCCAGAAGTCAAGCATTTTATCGATAGTGCTACCACATTACCCTCTCCTACTATCAGCACAATCTCTCATATTGCTACTACACCATCAAATGATCAGTCTGCAACTAGCCTGCTCCGTAACCATCCTTTGATTTTTGTTGCAGACATATGCAATCAGCCAGCTGATTCGTTCTTCCTCATAAAGTGCTTAGTAGTCAAAGTTGACACGAGGCATGGCTGGTGCTATGAAGGTTGCTCCAGGTTAAGGGTCCACTACACGGTTGAGGATTCATCTGGCAAGGCAACTGTAGTCTTCTTTGACAAACTTGCTTCTAATTTCTTCCAAAAGACTGCACTTGAGATGAATCACACTCTTATTAAGGAGGAACGTGAATATGATTTTCCTGATGAGCTAGACCTAATGGTTGGAAAGACGGTGCTGTTGAAACTTAAGCTGAACAAGTATAACGTTGACTTCCCAAATTCTGGCATATCTGTTGCATCATTCACACAGTGCACTGATTTGATGGATGAATTCAATGAGGTTAGCGATCAGAACACCCATGCTGAAGAAGAGGCCACTGACACAGTCGTTCCTGAATCTGTCACTGCTGACCCACTAGTATTGAATGAAGTTACTAATGTTGCCATCGACGAGAATGATGAAGACAGCCCCGGCATTGAGGAGATACCTCTGTCTAGGATAGCTGGCCCCTCAACTTACAGGCCAAAGAGGAAGGTAGCTGGGAAGAGGATCATTGGAGTTAAGGAGAAATGGGTTCGTTCACCCAATGCCTCACCTATCAAGACATCGTCCAAGCCTTTAAAGAGCATCAAGCAAGAGAAGAACTGA 1863 0.4278 MAFELHRLDELAPSVETWKVVVKVDRVFTRTEYDVTEKDLGYPKKLISLDMIVFDEQVLHLWGDMVRCVLFGDSANEAWKSYLPLKRMHKLVTLINYAVVNRQHGKFCLKNYVNATKEVNDSTDRWRITVRVIRRWNVYKKESPTEVFYVSMLLIDEEGTRIQASIMNKNLFDRFSAMAVEGITYFMANFVVSPNNKEYRATNHAFKLTLGTYTYVKEVLAQIPEYSYHFFPIHDIIKMKESNHVDYLIDVIGFVASIGHLEEYKSNNEIKNKLRLLLVDELGNTVGCVLYDDCATNVCMMDISTMQSPVVMIMQLGRIGFDDDGMAEICSSYHATQISCNPKFPEVKHFIDSATTLPSPTISTISHIATTPSNDQSATSLLRNHPLIFVADICNQPADSFFLIKCLVVKVDTRHGWCYEGCSRLRVHYTVEDSSGKATVVFFDKLASNFFQKTALEMNHTLIKEEREYDFPDELDLMVGKTVLLKLKLNKYNVDFPNSGISVASFTQCTDLMDEFNEVSDQNTHAEEEATDTVVPESVTADPLVLNEVTNVAIDENDEDSPGIEEIPLSRIAGPSTYRPKRKVAGKRIIGVKEKWVRSPNASPIKTSSKPLKSIKQEKN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3389g00001 620 Gene3D - 221 358 IPR012340 -
Pral3389g00001 620 Coils Coil 509 529 - -
Pral3389g00001 620 Gene3D - 112 218 IPR012340 -
Pral3389g00001 620 SUPERFAMILY Nucleic acid-binding proteins 228 353 IPR012340 -
Pral3389g00001 620 Pfam Domain of unknown function DUF223 152 238 IPR003871 -
Pral3389g00001 620 SUPERFAMILY Nucleic acid-binding proteins 118 219 IPR012340 -
Pral3389g00001 620 MobiDBLite consensus disorder prediction 600 620 - -
Pral3389g00001 620 CDD RPA1_DBD_A_like 127 208 - -
Pral3389g00001 620 Gene3D - 423 519 IPR012340 -
Pral3389g00001 620 SUPERFAMILY Nucleic acid-binding proteins 388 493 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3389g00001 Pral-Chr3389 1020 7150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3389g00001 76 468 Core DNA Replication Machinery Family AT5G61000 25.828 1.15e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3389g00001 - - pcin:129290097 382.874