Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3388g00008 ATGGGATTACTACCTATTTTTCTCATGCTCTTAAGCTTCTGTGGAGGTTTGATCACTGCCTTAGACTCTATTACATCATCTGTATTCGTCAAAGATTCAGAAACTGTAAGCTCAAACAACAGCGCGTTCAAACTCGGATTCTTCAGCCCCCAAAATACCACAGATCGTTATGTCGGAATCTGGCATGTCTTCAATTCCAAAGTCACATGGGTGGCTAACAAAAACCAACCGTTGCAGGATTCTTCTGGGGTCATTACTATATCTGAGGACAAAAATCTTGTACTATTGAATGGGACGAAAAGGATTTTCTGGTCATCAAATGTGTCAAACAAAGCATCGAGTTCCACTGCCCAACTTCTCAATTCTGGTAACCTTGTGCTGATAGACCAGACAGGCAAGACATTATGGGAGAGTTTCCAACATCCAGGTGACGCAGAATATTCAAATTTGGCAATTAGTGCCCACCAGAAAATTGGTTCATCTAGAAAAAACCCTTCTGAAAGAAAATTGGCTTACACCAGGAGAACAAACAAAGTAGGAGAGCAAAAGGTTCAAGAAAACTGTGATACTTATAATTACTGTGGGACATATGGGATCTGTGACTCCAGCAAATCACCAACCTGCAACTGTTTGAAAGGGTTTGAGCCGAGGAATATCGATGAATGGAATAATCAAAATTGGACGAGTGGGTGTGTGAGAAGGGCGTCACTACAGTGTGCAAGTGATGGAGGCAAAGATGATTGGTTTCTCGAGCTGCAGATGACAAATAATCCAAAAAATTCAACGCCATCATTTGTTTCTGAAGACACATGCAGAAATCAGTGCCTAAAAAATTGCAATTGTACAGCATATGCATATGTTTCTTCTTTTTCCTGCATGTACTGGACAGGAAACCTAACAGGCATAGTAAGATTGTCCAGTGGAGGAATTAATCTTTACGTCCGTCAAGCCTATTCAGAACACGGTAGGAAGAAAAAGGACTTCAAAGTAGTTATCACAGTAACAGTGACAGTAGGAGTGATTATCATTGCCATCAGTGCTTATATCTTAAAGATGTGTACTGCTAAATATTCTGCAAGAAAAAAGGAAAGAAATGCAAAGTTATTGCTGAAAAAGGAAGAAAACCCGCTAGGAGACCTGAAAATTGCAAAACTTGAGAAGCTACCACTGTTTGATTTTAGAATCCTCGCAACTGCAACCAACAACTTCAGAATTGCTAATAAGCTTGGAAGGGGTGGTTTTGGTCTGGTATACAAGGGAGAATTGCAAGATGGACAGGAAATAGCAGTGAAAAGACTCTCAAGAACTTCTAAACAAGGGCTGGAAGAGTTCATGAATGAAGTGGTTGTGATTTCAAAGCTACAACATCGTAATCTTGTAAGACTTTTAGGATGCTGTATTGAAGGAGAGGAAAAAATGTTGGTATATGAGTACATGCCTAACAAGAGTTTGGATGCTTTTATATATGATCCTGTTAAAAAGAAGGCTTTAGATTGGAAAAACCGCTTGAACATTATCAAAGGAATTGCTCGTGGATTACTTTATCTCCATAGAGATTCTAGACTAAAAATTATACATAGAGACCTAAAGCCAAGTAATATCTTACTAGATGCACAACTCAATCCTAAAATATCAGACTTCGGTTTGGCAAGAATCTTTGAATGCAGTGAAGATGAAGGCAATACTCGAAGGGTTGTTGGAACATATGGTTATATGTCACCCGAATATGCAATGGAAGGACTATTTTCAGAAAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTATTTGAGATCATCAGTGGTAGGAAAAATACAAGCATTTGCGATCATGAACATTCATTGAACCTCTTGGAACTTGCATGGAAATTGTGGAATGAAGAAAATATCGAATCTCTCATAGATTCAGAAATATCTGATCCAGACTATGTCAATGACATTGTGAGATGCATACACATAGGGTTTTTATGTGTTCAAGAACATGCAAGAGATAGGCCATCTATGGGCACTGTAAATTCAATGCTTAACAATCACATTGTTAATCTTCCGCCATCATGTCAGCCTGCTTACATACAGAGGAGGGTTGTGACAAATGCAGAGTCATCTCAACAGAGCAATAGATCATGCTCTGTCAATAGCGTCACTCTCACAAACATGCAAGGGAGATAA 2166 0.3897 MGLLPIFLMLLSFCGGLITALDSITSSVFVKDSETVSSNNSAFKLGFFSPQNTTDRYVGIWHVFNSKVTWVANKNQPLQDSSGVITISEDKNLVLLNGTKRIFWSSNVSNKASSSTAQLLNSGNLVLIDQTGKTLWESFQHPGDAEYSNLAISAHQKIGSSRKNPSERKLAYTRRTNKVGEQKVQENCDTYNYCGTYGICDSSKSPTCNCLKGFEPRNIDEWNNQNWTSGCVRRASLQCASDGGKDDWFLELQMTNNPKNSTPSFVSEDTCRNQCLKNCNCTAYAYVSSFSCMYWTGNLTGIVRLSSGGINLYVRQAYSEHGRKKKDFKVVITVTVTVGVIIIAISAYILKMCTAKYSARKKERNAKLLLKKEENPLGDLKIAKLEKLPLFDFRILATATNNFRIANKLGRGGFGLVYKGELQDGQEIAVKRLSRTSKQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNKSLDAFIYDPVKKKALDWKNRLNIIKGIARGLLYLHRDSRLKIIHRDLKPSNILLDAQLNPKISDFGLARIFECSEDEGNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLFEIISGRKNTSICDHEHSLNLLELAWKLWNEENIESLIDSEISDPDYVNDIVRCIHIGFLCVQEHARDRPSMGTVNSMLNNHIVNLPPSCQPAYIQRRVVTNAESSQQSNRSCSVNSVTLTNMQGR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3388g00008 721 ProSitePatterns Protein kinases ATP-binding region signature. 409 431 IPR017441 GO:0005524
Pral3388g00008 721 Gene3D Transferase(Phosphotransferase) domain 1 479 681 - -
Pral3388g00008 721 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 682 - -
Pral3388g00008 721 SMART ntp_6 243 316 IPR003609 -
Pral3388g00008 721 CDD STKc_IRAK 409 676 - -
Pral3388g00008 721 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 101 699 - -
Pral3388g00008 721 Pfam Domain of unknown function (DUF3403) 679 721 IPR021820 GO:0004674
Pral3388g00008 721 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 359 478 - -
Pral3388g00008 721 SUPERFAMILY Protein kinase-like (PK-like) 388 709 IPR011009 -
Pral3388g00008 721 SMART blect_4 27 142 IPR001480 -
Pral3388g00008 721 Pfam S-locus glycoprotein domain 178 217 IPR000858 GO:0048544
Pral3388g00008 721 CDD PAN_AP_plant 237 315 - -
Pral3388g00008 721 ProSiteProfiles Protein kinase domain profile. 403 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3388g00008 721 PIRSF SRK 172 721 IPR024171 GO:0004674
Pral3388g00008 721 PIRSF SRK 1 181 IPR024171 GO:0004674
Pral3388g00008 721 ProSiteProfiles PAN/Apple domain profile. 239 317 IPR003609 -
Pral3388g00008 721 CDD B_lectin 27 142 IPR001480 -
Pral3388g00008 721 Pfam D-mannose binding lectin 68 164 IPR001480 -
Pral3388g00008 721 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 139 - -
Pral3388g00008 721 SMART serkin_6 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3388g00008 721 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 153 IPR036426 -
Pral3388g00008 721 Gene3D Phosphorylase Kinase; domain 1 379 478 - -
Pral3388g00008 721 Pfam Protein tyrosine and serine/threonine kinase 405 670 IPR001245 GO:0004672|GO:0006468
Pral3388g00008 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Pral3388g00008 721 ProSiteProfiles Bulb-type lectin domain profile. 21 140 IPR001480 -
Pral3388g00008 721 Gene3D - 18 140 IPR036426 -
Pral3388g00008 721 Pfam PAN-like domain 244 300 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3388g00008 Pral-Chr3388 268925 272727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3388g00008 357 721 Receptor kinase-like Gene Family AT4G23140 52.660 2.60e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3388g00008 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3388g00008 - - pcin:129284814 1233.01