Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3388g00007 ATGGGATTACTACCTATTTTTCTCATGCTCTTAAGCTTCTGTGGAGGTTTGATCACTGCCTTAGACTCTATTACATCATCTGTATTCGTCAAAGATTCAGAAACTGTAAGCTCAAACAACAGCGCGTTCAAACTCGGATTCTTCAGCCCCCAAAATACCACAGATCGTTATGTCGGAATCTGGCATGTCTTCAATTCCAAAGTCACATGGGTGGCTAACAAAAACCAACCGTTGCAGGATTCTTCTGGGGTCATTACTATATCTGAGGACAAAAATCTTGTACTATTGAATGGGACGAAAAGGATTTTCTGGTCATCAAATGTGTCAAACAAAGCATCGAGTTCCACTGCCCAACTTCTCAATTCTGGTAACCTTGTGCTGATAGACCAGACAGGCAAGACATTATGGGAGAGTTTCCAACATCCAGGTGACGCAGAATATTCAAATTTGGCAATTAGTGCCCACCAGAAAATTGGTTCATCTAGAAAAAACCCTTCTGAAAGAAAATTGGCTTACACCAGGAGAACAAACAAAGTAGGAGAGCAAAAGGTTCAAGAAAACTGTGATACTTATAATTACTGTGGGACATATGGGATCTGTGACTCCAGCAAATCACCAACCTGCAACTGTTTGAAAGGGTTTGAGCCGAGGAATATCGATGAATGGAATAATCAAAATTGGACGAGTGGGTGTGTGAGAAGGGCGTCACTACAGTGTGCAAGTGATGGAGGCAAAGATGATTGGTTTCTCGAGCTGCAGATGACAAATAATCCAAAAAATTCAACGCCATCATTTGTTTCTGAAGACACATGCAGAAATCAGTGCCTAAAAAATTGCAATTGTACAGCATATGCATATGTTTCTTCTTTTTCCTGCATGTACTGGACAGGAAACCTAACAGGCATAGTAAGATTGTCCAGTGGAGGAATTAATCTTTACGTCCGTCAAGCCTATTCAGAACACGGTAGGAAGAAAAAGGACTTCAAAGTAGTTATCACAGTAACAGTGACAGTAGGAGTGATTATCATTGCCATCAGTGCTTATATCTTAAAGATGTGTACTGCTAAATATTCTGCAAGAAAAAAGGAAAGAAATGCAAAGTTATTGCTGAAAAAGGAAGAAAACCCGCTAGGAGACCTGAAAATTGCAAAACTTGAGAAGCTACCACTGTTTGATTTTAGAATCCTCGCAACTGCAACCAACAACTTCAGAATTGCTAATAAGCTTGGAAGGGGTGGTTTTGGTCTGGTATACAAGGGAGAATTGCAAGATGGACAGGAAATAGCAGTGAAAAGACTCTCAAGAACTTCTAAACAAGGGCTGGAAGAGTTCATGAATGAAGTGGTTGTGATTTCAAAGCTACAACATCGTAATCTTGTAAGACTTTTAGGATGCTGTATTGAAGGAGAGGAAAAAATGTTGGTATATGAGTACATGCCTAACAAGAGTTTGGATGCTTTTATATATGATGCACAACTCAATCCTAAAATATCAGACTTCGGTTTGGCAAGAATCTTTGAATGCAGTGAAGATGAAGGCAATACTCGAAGGGTTGTTGGAACATATGGTTATATGTCACCCGAATATGCAATGGAAGGACTATTTTCAGAAAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTATTTGAGATCATCAGTGGTAGGAAAAATACAAGCATTTGCGATCATGAACATTCATTGAACCTCTTGGAACTTGCATGGAAATTGTGGAATGAAGAAAATATCGAATCTCTCATAGATTCAGAAATATCTGATCCAGACTATGTCAATGACATTGTGAGATGCATACACATAGGGTTTTTATGTGTTCAAGAACATGCAAGAGATAGGCCATCTATGGGCACTGTAAATTCAATGCTTAACAATCACATTGTTAATCTTCCGCCATCATGTCAGCCTGCTTACATACAGAGGAGGGTTGTGACAAATGCAGAGTCATCTCAACAGAGCAATAGATCATGCTCTGTCAATAGCGTCACTCTCACAAACATGCAAGGGAGATAA 2025 0.3941 MGLLPIFLMLLSFCGGLITALDSITSSVFVKDSETVSSNNSAFKLGFFSPQNTTDRYVGIWHVFNSKVTWVANKNQPLQDSSGVITISEDKNLVLLNGTKRIFWSSNVSNKASSSTAQLLNSGNLVLIDQTGKTLWESFQHPGDAEYSNLAISAHQKIGSSRKNPSERKLAYTRRTNKVGEQKVQENCDTYNYCGTYGICDSSKSPTCNCLKGFEPRNIDEWNNQNWTSGCVRRASLQCASDGGKDDWFLELQMTNNPKNSTPSFVSEDTCRNQCLKNCNCTAYAYVSSFSCMYWTGNLTGIVRLSSGGINLYVRQAYSEHGRKKKDFKVVITVTVTVGVIIIAISAYILKMCTAKYSARKKERNAKLLLKKEENPLGDLKIAKLEKLPLFDFRILATATNNFRIANKLGRGGFGLVYKGELQDGQEIAVKRLSRTSKQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNKSLDAFIYDAQLNPKISDFGLARIFECSEDEGNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLFEIISGRKNTSICDHEHSLNLLELAWKLWNEENIESLIDSEISDPDYVNDIVRCIHIGFLCVQEHARDRPSMGTVNSMLNNHIVNLPPSCQPAYIQRRVVTNAESSQQSNRSCSVNSVTLTNMQGR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3388g00007 674 CDD PAN_AP_plant 237 315 - -
Pral3388g00007 674 Pfam S-locus glycoprotein domain 178 217 IPR000858 GO:0048544
Pral3388g00007 674 Gene3D Phosphorylase Kinase; domain 1 379 478 - -
Pral3388g00007 674 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 359 478 - -
Pral3388g00007 674 ProSitePatterns Protein kinases ATP-binding region signature. 409 431 IPR017441 GO:0005524
Pral3388g00007 674 ProSiteProfiles PAN/Apple domain profile. 239 317 IPR003609 -
Pral3388g00007 674 CDD B_lectin 27 142 IPR001480 -
Pral3388g00007 674 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 139 - -
Pral3388g00007 674 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 185 618 - -
Pral3388g00007 674 Pfam PAN-like domain 244 300 IPR003609 -
Pral3388g00007 674 Pfam Protein tyrosine and serine/threonine kinase 405 490 IPR001245 GO:0004672|GO:0006468
Pral3388g00007 674 Pfam Protein tyrosine and serine/threonine kinase 495 623 IPR001245 GO:0004672|GO:0006468
Pral3388g00007 674 SMART ntp_6 243 316 IPR003609 -
Pral3388g00007 674 ProSiteProfiles Protein kinase domain profile. 403 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3388g00007 674 Pfam Domain of unknown function (DUF3403) 632 674 IPR021820 GO:0004674
Pral3388g00007 674 Gene3D - 18 140 IPR036426 -
Pral3388g00007 674 SUPERFAMILY Protein kinase-like (PK-like) 388 662 IPR011009 -
Pral3388g00007 674 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 153 IPR036426 -
Pral3388g00007 674 Pfam D-mannose binding lectin 68 164 IPR001480 -
Pral3388g00007 674 ProSiteProfiles Bulb-type lectin domain profile. 21 140 IPR001480 -
Pral3388g00007 674 SMART blect_4 27 142 IPR001480 -
Pral3388g00007 674 Gene3D Transferase(Phosphotransferase) domain 1 483 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3388g00007 Pral-Chr3388 268925 272728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3388g00007 357 674 Receptor kinase-like Gene Family AT4G23140 43.351 1.48e-89 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3388g00007 PK_Tyr_Ser-Thr 3.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3388g00007 - - pcin:129284814 1118.99