Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3388g00005 ATGAAGTTCTATACTTCAAAAGAGCTAATTCTGATAAATATCCCATTGTTCCTTCTCTTGGTGCTTCATTCTTCTTGTCACTCCCTTCACAGAATAACCCCAAGCCAATCCCTTAAAGACGGCGACGTTTTGCTCTCAGATGGAGGAACCTTTGGCCTCGGTTTCTTCACCCCTGGCAACAATTCAAGAAAGCGCTACGTTGGAATATGGTATAATAAGTCCTCTGAACCAGCTGTTGTGTGGGTTGCTAATAGACAGAATCCTCTTTATAATACTTCTGGAGTTTTGTCGATTGATACGTATGGAAACATCATTCTCGTTTACAATGATACTAGTTTAAACAGAAACAGCCCCATTTGGTCTTCCGACGTTTCAATCTCATCTTTTAGTCATACCTTTGCTGAGCTTCAAGAAACTGGAAACTTGGTTTTAATCAGAAATGAAGGAAGAAGATCGAAGGTTGTATGGCAGAGTTTTGACTATCCTAGTGATACATTGCTTTCGTACATGAAAATGGGGGTGGATCGGAAAACTGGTTTCAATCGGTTCCTTACATCATGGAAATCCCCAGACGACCCAGGATTAGGGAACGCGACTCGGATGATCAACCCAACAGGTTATCCTCAAATGTTCATTTATAAAAACGGGGCTCCGTTTTGGCGAGCCGGATCTTGGACGGGTCAAAGATGGAGTGGTATACCTCTGATGACTAACATCTTCAACATCACCTATATTGACAATGCCAATGAAGTTAGCTACATGACCCGAGTCATGGACCCTTCAGTCTTCTTAAGAATTGTGATAAACAATAGTGGTTATTATTTACGAAATATTTGGCAAGTTAACGAGAATAAATGGACCCAAACATTGTACGGTCCAAGAGAGGATTGTGACCACTATGCTCACTGTGGGTCAAATAGTAACTGTGACCCGTATAACGGGGACAAGTTCGAATGCGTGTGCTTGCCCGGATTCGAACCCGTGAACCCGCAAGAGTGGAATATGAGAAATGGATCGAGCGGGTGCATGAGGAAGAAGAATGTGTCCATATGTAAAAGTGGGGAAGGCTTTGTGAAAGTGGCACGTGTGAAGGTGCCAGATACATCAAAGGCACGTGCAGATAAGAGTGAGAGTATAAGCTTGAAAGGTTGCGAGGAAAAGTGCTTGAGGGATTGTTCGTGTCTAGCATATACGAATGTGGATGAGGTTAAACAAAGCGGGTGCTTGACGTGGCATGCTGATATGGAAGACATCAGAGCATTTGACAGCGTGGGGCAAGATTTGTACGTCCGTGTGGATGCGGAAGAATTGGCTAAAGATGAAAGGAAGCATTATGGTTCTCTTGGCAAGAAGGGGATGGTGACACTAGTAGTCATTTCTATTTGCTTGACAACGTTCCTGGCAATCTCCTTTGTGTATTGGTTTGTAAAGAATAAGAATCAAGCAAAAAGAATGCACGAAAGCGATTTGTTTGATGGAGCAGACAATTCCGATTTAACCCTCTTTGATCTAAAGGACATAGTTGAGGCAACAAACAATTTCTCAGACACTAAAATGCTTGGACGAGGTGGTTTTGGTTCTGTATATAAGGGTCAACTCAAAGATGGAATGGAAATAGCAGTTAAGAGGCTATCAAAGTATTCTGGACAGGGCGTTGAAGAATTCAGAAATGAGGTTACTTTAATTGCAAAGCTCCAACATAGGAATCTTGTAAGGATCCTAGGTTGTTGCGTGGATGGAGAAGAGAAGATGTTGATATATGAATATTTGCCAAACAAAAGCTTGGACTCATTCATTTTTGATCAAGCAAAAAAACTACAACTAGACTGGAGAAAAAGATTTGGCATCATTTGTGGAGTTGCAAGAGGAATTTTATATCTTCATCAAGATTCAAGATTAAGAATAATTCATAGAGACTTAAAGGCCAGCAATGTTTTGTTAGATTCTACAATGAATCCCAAAATTGCAGATTTTGGCATGGCAAGAATATTTGGTGGAGACCAAACTGAAGCAAATACAAACCGTATTGTTGGAACCTATGGTTATATGTCGCCTGAATATGCAATGGAAGGAATTTTCTCAATAAAATCGGATGCATATAGCTTTGGAATTTTACTTTTGGAGATTGTTACTGGCAGAAAGAATAGTGGTCATTATAATGACATTACTTCTACTTTGGTTGGACATATTTGGAACCTTTGGAGAGAGAGTAGAGCTGTGGAGATTGTTGATCCATCATTACTAGGTGAAACATGCCTTGAAAATGCAGTTCAGAAATGCATCCAGATTGGGCTTTTATGTGTGCAAGAATACGCAACAGATAGGCCTACTATGTTAGAAGTTATTTCCATGTTGGATAATGACTCAACTCTTCCTCCTCCAAAGAAGCCAGCATTTCTTTTCAAGAAAACTGATTGTGATGATTCAAATCCATCAGTCATTGAAGGGGTTAATTCAGTAAATGAGATGAGCACTACTGTGGTTGAAGCTCGTTGA 2496 0.405 MKFYTSKELILINIPLFLLLVLHSSCHSLHRITPSQSLKDGDVLLSDGGTFGLGFFTPGNNSRKRYVGIWYNKSSEPAVVWVANRQNPLYNTSGVLSIDTYGNIILVYNDTSLNRNSPIWSSDVSISSFSHTFAELQETGNLVLIRNEGRRSKVVWQSFDYPSDTLLSYMKMGVDRKTGFNRFLTSWKSPDDPGLGNATRMINPTGYPQMFIYKNGAPFWRAGSWTGQRWSGIPLMTNIFNITYIDNANEVSYMTRVMDPSVFLRIVINNSGYYLRNIWQVNENKWTQTLYGPREDCDHYAHCGSNSNCDPYNGDKFECVCLPGFEPVNPQEWNMRNGSSGCMRKKNVSICKSGEGFVKVARVKVPDTSKARADKSESISLKGCEEKCLRDCSCLAYTNVDEVKQSGCLTWHADMEDIRAFDSVGQDLYVRVDAEELAKDERKHYGSLGKKGMVTLVVISICLTTFLAISFVYWFVKNKNQAKRMHESDLFDGADNSDLTLFDLKDIVEATNNFSDTKMLGRGGFGSVYKGQLKDGMEIAVKRLSKYSGQGVEEFRNEVTLIAKLQHRNLVRILGCCVDGEEKMLIYEYLPNKSLDSFIFDQAKKLQLDWRKRFGIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSTMNPKIADFGMARIFGGDQTEANTNRIVGTYGYMSPEYAMEGIFSIKSDAYSFGILLLEIVTGRKNSGHYNDITSTLVGHIWNLWRESRAVEIVDPSLLGETCLENAVQKCIQIGLLCVQEYATDRPTMLEVISMLDNDSTLPPPKKPAFLFKKTDCDDSNPSVIEGVNSVNEMSTTVVEAR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3388g00005 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 477 589 - -
Pral3388g00005 831 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Pral3388g00005 831 Pfam D-mannose binding lectin 79 188 IPR001480 -
Pral3388g00005 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 159 - -
Pral3388g00005 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 793 - -
Pral3388g00005 831 Pfam PAN-like domain 351 418 IPR003609 -
Pral3388g00005 831 CDD B_lectin 35 162 IPR001480 -
Pral3388g00005 831 Pfam S-locus glycoprotein domain 220 328 IPR000858 GO:0048544
Pral3388g00005 831 Gene3D Transferase(Phosphotransferase) domain 1 590 791 - -
Pral3388g00005 831 CDD PAN_AP_plant 351 432 - -
Pral3388g00005 831 ProSiteProfiles EGF-like domain profile. 293 331 IPR000742 -
Pral3388g00005 831 Gene3D - 26 159 IPR036426 -
Pral3388g00005 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pral3388g00005 831 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 776 - -
Pral3388g00005 831 PIRSF SRK 2 831 IPR024171 GO:0004674
Pral3388g00005 831 SMART serkin_6 514 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3388g00005 831 SUPERFAMILY Protein kinase-like (PK-like) 498 785 IPR011009 -
Pral3388g00005 831 Pfam Protein tyrosine and serine/threonine kinase 517 785 IPR001245 GO:0004672|GO:0006468
Pral3388g00005 831 SMART blect_4 35 162 IPR001480 -
Pral3388g00005 831 ProSiteProfiles Protein kinase domain profile. 514 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3388g00005 831 SMART ntp_6 352 432 IPR003609 -
Pral3388g00005 831 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Pral3388g00005 831 Pfam Domain of unknown function (DUF3403) 787 831 IPR021820 GO:0004674
Pral3388g00005 831 CDD STKc_IRAK 520 787 - -
Pral3388g00005 831 ProSiteProfiles Bulb-type lectin domain profile. 29 157 IPR001480 -
Pral3388g00005 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 193 IPR036426 -
Pral3388g00005 831 Gene3D Phosphorylase Kinase; domain 1 474 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3388g00005 Pral-Chr3388 245504 251375 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3388g00005 502 831 Receptor kinase-like Gene Family AT4G11530 57.692 3.91e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3388g00005 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3388g00005 - - pcin:129284814 1289.25