Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3388g00002 ATGAAGCCTTATTCTGCGAAAGCCCTAATTCTGATAAATGTTCCATTGTTTCTTCTATTGGTGCTTCATTCTTCTTGCCATTCTCTTCATAGAATAACCCCAAGCCAGCCCCTCAAAGACGGCGATGTTTTGCTCTCAAATGGAGGAGCCTTTGCCCTCGGTTTTTTCACTCCTAGCAACAATTCAAGAAAGCGCTATGTTGGAATATGGTTTGCAAGATCCTCTAAACCAGTTGTTGTGTGGGTTGCTAATAGACAGACTCCTCTCAATAATACTTTTGGAGTTTTGTCCATTGATGTCCATGGGAACATCGTTCTCGTTTACAATGATACTAATCTAAATAGAAATGCCCCCATTTGGTCTTCCAGTGTTTCTTTCTCATCTTTTAGTCACACCTTTGCCGAGCTTCAGGACACTGGAAACTTGGTTTTAATCAGGAATAAAGGGAGGCCAATATGGCAGAGCTTTGACTACCCTGGTGACACGATGCTTCCGTTCATGAAAATTGGGGTGGACCTGAGAACTGGTTTTAATTGGTCCATGACATCATGGAAATCCCCAGACGACCCAGCAATGGGGGACGTGACTCACATAATTGACCCAATAGGTTATCCTCAACTGTTCTCGCTTAAAAATGGAGCTCCATTTTGGCGAGGTGGGTCTTGGACGGGTCAGAGATTTAGTGGAATACCACAAATGACGCCCAACTTCATCTTCAACGTCACTTATATTGACAATGCCACTGAAGTTAGCACTGAGACCCGAGTCATGGACCCTTCAATATTCTTAATAACGTTGCTAGACAACACTGGCCATGTGACACGAACTATTTGGCGAGCTAAGGAGAATAATTGGCTCCAAGTTTGGTATGGTCCGACGGAGGACTGTGACCACTATTGTTGGTGTGGGTCGAATAGTAAGTGTGACCCATATAATATGAACAAGTTTGAGTGTGTGTGCTTGCCCGGATTCGAACCCATGAACCCATATGAGTGGAATATGAAAAATGGGTCAAGTGGGTGTGTGAGGAAGAAGAATGTGTCCACGTGTCGTAGCGGGGAGGGGTTTGTGAAAGTGGCACATGTGAAGGTGCCAGATACATCAAAGGCACGTGTGGATAAGAGCGAGAGTATGAACTTGAAAAGTTGTGAGGAAAAGTGCCTGAGGGATTGTTCGTGTGTAGCGTATACGAATGCGGATGAGGTCAAAGAAAGTGGGTGTTTGACATGGCATGATGATATGGAAGACATCAGAACATTCGAAAATGTGGGCCAAGATTTGTATGTGCGTGTGGATGCAAATGAATTGGCTAGATATGAAAGGAAGCATTATGGTTCTCTTGGCAAGAAGGGGATGATGACCCTCATAGTTATTTCTATTTGCTTGATAACATTCTTGGTCATCTCTTTCTTATGTTGGTTTGTAATAAAGAACAGGAATCAAGCAAAAGGAATGCACGGAGAATATTTATTTGACGGAGAAGACAATTCCAATTTAACTCTATTTGACCTAAAGGACATAATTGAGGCAACAAACAATTTCGCAGACGCTAATATGCTTGGAAAAGGTGGCTTTGGTTCAGTATATAAGGGTCTACTTAAAGATGGAATGGAAATAGCAGTTAAGAGGCTATCAAAGTATTCTGGACAAGGCATCGAAGAATTCAGGAATGAGGTTACTTTAATTGCAAAGCTCCAACATAGAAATCTTGTAAGGATCTTAGGTTGTTGCATAGATGGAGAACAGAAGATGTTGATATATGAATATTTGCCAAACAAAAGCTTGGACTCCTTCATATTTGATTTCGGTATGGCAAGAATATTTGGTGGTGACCAAACTGAAGCAAACACAAACCGTGTTGTTGGAACTTATGGTTATATGTCGCCAGAATATGCAATGGAAGGAATTTTTTCAATAAAATCAGATGCGTACAGTTTTGGAGTTTTACTTTTGGAGATTGTTACTAGTAGAAAGAATAGTGGTCATTATGATGACATTACTTCTACTTTGGTTGGACATATTTGGAATCTTTGGAGAGAAAGCAGAGCTATGGAGATTATTGATCCATCGTTAGTAGGTGATCCATGCCTTGAACATGAAGTTCTCAAATGCATTCATGTTGGACTTTTATGTGTGCAAGAATATCCAACAGATAGGCCTACCATGTCAGAAGTTGTTTTCATGTTGGATAATGACTCAACTCTTCCTCATCCAAAGCAACCAGCATTTCTTTTCAAGAAAACTAATTGTGATGATTCAAATCCGTCAATCAGTGAAGGAGTTAATTCAGTTAATGAGATGAGTACTACTGTGATTGAAGCTCGCTGA 2328 0.4089 MKPYSAKALILINVPLFLLLVLHSSCHSLHRITPSQPLKDGDVLLSNGGAFALGFFTPSNNSRKRYVGIWFARSSKPVVVWVANRQTPLNNTFGVLSIDVHGNIVLVYNDTNLNRNAPIWSSSVSFSSFSHTFAELQDTGNLVLIRNKGRPIWQSFDYPGDTMLPFMKIGVDLRTGFNWSMTSWKSPDDPAMGDVTHIIDPIGYPQLFSLKNGAPFWRGGSWTGQRFSGIPQMTPNFIFNVTYIDNATEVSTETRVMDPSIFLITLLDNTGHVTRTIWRAKENNWLQVWYGPTEDCDHYCWCGSNSKCDPYNMNKFECVCLPGFEPMNPYEWNMKNGSSGCVRKKNVSTCRSGEGFVKVAHVKVPDTSKARVDKSESMNLKSCEEKCLRDCSCVAYTNADEVKESGCLTWHDDMEDIRTFENVGQDLYVRVDANELARYERKHYGSLGKKGMMTLIVISICLITFLVISFLCWFVIKNRNQAKGMHGEYLFDGEDNSNLTLFDLKDIIEATNNFADANMLGKGGFGSVYKGLLKDGMEIAVKRLSKYSGQGIEEFRNEVTLIAKLQHRNLVRILGCCIDGEQKMLIYEYLPNKSLDSFIFDFGMARIFGGDQTEANTNRVVGTYGYMSPEYAMEGIFSIKSDAYSFGVLLLEIVTSRKNSGHYDDITSTLVGHIWNLWRESRAMEIIDPSLVGDPCLEHEVLKCIHVGLLCVQEYPTDRPTMSEVVFMLDNDSTLPHPKQPAFLFKKTNCDDSNPSISEGVNSVNEMSTTVIEAR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3388g00002 775 SUPERFAMILY Protein kinase-like (PK-like) 499 752 IPR011009 -
Pral3388g00002 775 Pfam Domain of unknown function (DUF3403) 731 775 IPR021820 GO:0004674
Pral3388g00002 775 CDD B_lectin 35 159 IPR001480 -
Pral3388g00002 775 PIRSF SRK 599 775 IPR024171 GO:0004674
Pral3388g00002 775 PIRSF SRK 2 601 IPR024171 GO:0004674
Pral3388g00002 775 Gene3D - 26 156 IPR036426 -
Pral3388g00002 775 SMART blect_4 35 159 IPR001480 -
Pral3388g00002 775 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 480 589 - -
Pral3388g00002 775 ProSiteProfiles PAN/Apple domain profile. 350 432 IPR003609 -
Pral3388g00002 775 ProSiteProfiles Bulb-type lectin domain profile. 29 157 IPR001480 -
Pral3388g00002 775 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 156 - -
Pral3388g00002 775 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Pral3388g00002 775 ProSiteProfiles Protein kinase domain profile. 514 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3388g00002 775 SMART ntp_6 351 431 IPR003609 -
Pral3388g00002 775 Pfam Protein tyrosine and serine/threonine kinase 518 599 IPR001245 GO:0004672|GO:0006468
Pral3388g00002 775 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 190 IPR036426 -
Pral3388g00002 775 Gene3D Transferase(Phosphotransferase) domain 1 586 740 - -
Pral3388g00002 775 CDD PAN_AP_plant 348 431 - -
Pral3388g00002 775 Gene3D Phosphorylase Kinase; domain 1 477 585 - -
Pral3388g00002 775 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Pral3388g00002 775 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 608 734 - -
Pral3388g00002 775 Pfam D-mannose binding lectin 79 185 IPR001480 -
Pral3388g00002 775 Pfam PAN-like domain 350 417 IPR003609 -
Pral3388g00002 775 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3388g00002 Pral-Chr3388 173392 177895 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3388g00002 452 743 Receptor kinase-like Gene Family AT4G23230 43.020 8.83e-83 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3388g00002 S_locus_glycop 2.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3388g00002 - - pcin:129284814 1244.18