Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3387g00021 ATGGGAGAAGTTTGTAAAGTGCTTGAGGGGCTGAAGCCGGCGATGTTAATGGTGGTTCTTCAGCTGACATACGCCGGCATCAATGTTCTGTACAAGCTCGCCGTCAACGACGGCATGAACCTCAGAATCGTCATTGCTTATCGTTATATATTCGCCACTATTTTCATTGCTCCTCTCGCTTTCTTTCTCGAAAGGAATAAAAGACCAAAGATGACTTGGAGCATACTGTTTCAGGCATTTCTATGTGGGTTGTTTGGAGGAGCATTGACACAAAACTTGTACTTGGAATCATTGGCTTTAACTTCTGCAACATTTGCTACCACCATGGACAATCTTACTCCAGCCATCACTTTTCTCATGGCCGTCCCCTTCGGTTTGGAGACACTGAGTTTAAGAACAGCGGCAGGACAAGGGAAGATCATTGGAACAATAGTGTCAGTTGGGGGGGCCATGGTTCTAACACTGGTCAAAGGCACAAAAATAGACACAGGTTCCTTCCACGTCACCCTCATGCATTATCGTGAGGGACACGTGGCATCGGCACTAGCTCCCTCTAGTGCGAGAGCTCTCTTGGGTGCCCTTTGTTGTCTAGGGAACAGCGCTACTCAAGCTTTATGGCTTATCATTCAGGCTAAGATGAGCAAGACTTATCCATGTTATTATTCAAGCACAGCTCTAATGAGTTTCATGGCTACAATCTTATCAACTGCATATGCTTTTGCTTTTGAGAGCGATTTGAATCAATGGAAGTTTGGTTGGGATATTAGGCTTCTCACAGTGGCCTATGGGGGAATTATTGTGTCTGGAATAATGGTGGTGGTAATGGCATGGTGTGCGCACATGAAAGGCCCTCTTTATGTGGCTGCTTTTTTTCCTCTTCTCCTCATCTTTGTGGCCTTGGCTGGTTCTTTTATGTTAGACGAACAGTTATATCTTGGAAGTATAATAGGAGGATTGTTGTTAGTGTGTGGGTTGTATATGGTTCTATGGGGGAAAGGCAAAGAGATGAAGATGATGAATCAACTTGTTCCTTCACAAAGTAGCTTTCCTGAAATCAAAGTGGGATCTCCAACGGATGGTAAAGGCAGCCCTTGTAATGACAATCATGAGGTTGAATTGGTTATGGGTTGTGATGATTCAAACATTCATCAAAAATTGCAATTAATGAAGTAA 1173 0.4373 MGEVCKVLEGLKPAMLMVVLQLTYAGINVLYKLAVNDGMNLRIVIAYRYIFATIFIAPLAFFLERNKRPKMTWSILFQAFLCGLFGGALTQNLYLESLALTSATFATTMDNLTPAITFLMAVPFGLETLSLRTAAGQGKIIGTIVSVGGAMVLTLVKGTKIDTGSFHVTLMHYREGHVASALAPSSARALLGALCCLGNSATQALWLIIQAKMSKTYPCYYSSTALMSFMATILSTAYAFAFESDLNQWKFGWDIRLLTVAYGGIIVSGIMVVVMAWCAHMKGPLYVAAFFPLLLIFVALAGSFMLDEQLYLGSIIGGLLLVCGLYMVLWGKGKEMKMMNQLVPSQSSFPEIKVGSPTDGKGSPCNDNHEVELVMGCDDSNIHQKLQLMK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3387g00021 390 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Pral3387g00021 390 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Pral3387g00021 390 Pfam EamA-like transporter family 13 151 IPR000620 GO:0016020
Pral3387g00021 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 145 - -
Pral3387g00021 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3387g00021 Pral-Chr3387 379648 382288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3387g00021 1 339 Nodulin-like Gene Family AT1G68170 41.888 6.58e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3387g00021 - - tpra:123910665 445.277