Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3387g00016 ATGGAGGATTTACGCAAGATGTTGAATGGGTTAAAGCCAGTGATATTAATGGTGATGGTTCAGATTGCTTTTGCAGCAGTGAATGTGTTATATAAGCTCGCCATTAATGATGGAATGAGCATGAGGATTGCTACCGCCTATCGTCTTCTCTTTGCATCTGCTTTTACTGTTCCTCTCGCTCTTGTCTTTGAAAGGAACAAGAGACCAAAGCTTACTTGGAGAGTACTTTTCATGGCATTTCTTTGTGGCTTATTTGGGGGAAGTTTATTTCAAAACCTCTACTTTGAGGCTCTGGCTTTAACATCGGCAACGTTTGTTTCTGCTATTTACAACCTTATTCCGGCCATCACTTTCATCTTGGCTATCTCTTGTGGGTTTGAAAGATTAAGTTTGGGAGCACCAGGAGGAAAAGCGAAGGTGTTAGGAACTATAATAGGCATTGGTGGGGCAATGCTTCTTACTTTCTTCAAAGGCTTCGAAATTCACATTTGGTCCTTCCACGTTAACCTTTTGCATCCCCATCATCATGACCAAAACGGCGTCGTATTGACCCCACAACATGCTCACTCAGAATTGCTTGGTGTTCTCTGTGCCCTTGCAAGCTGCTTCTCCTATGCCTTTTGGCTAATTATTCAGGCTAAGATGAGTGGGGAATATCCGTGCTATCTCTCAAGCACATCTTTGATGTCTACAATGGGATCAATACAAGCCACTGTGTTTGCCCTCTGTATGGAAAGAGATTTTAATCAATGGAAGTTGGGTTGGAATGTTAGGCTCCTGGCTGTTTCTTTTGCGGGGATTGCTGCATCTGGGATGGTGGTGATAGTGATCGCGTGGTGTGTGAGGATGAGGGGTCCAATGTTTGCTTCTGCATTCACCCCTTTAATGCTTGTAATAGTGGCCATTGCTGCTTCTTTGACCTTGAATGAGAAGCTCTACTTGGGAAGTGTGGTTGGAGCATTGTTGATAGTGTGTGGGTTGTACGTTGTGCTGTGGGGAAAGGGCAAAGAAATGAGAACGATGACTCAGTTGGTGCCATCATCAGAAATGAGCCAACAACATCATCTTGATGAGCCCATTCAAGTTGTAGTCACCAACGTATCAGATCCTAACCATCACAAGATTTCGCCAGAGCAATAA 1140 0.4386 MEDLRKMLNGLKPVILMVMVQIAFAAVNVLYKLAINDGMSMRIATAYRLLFASAFTVPLALVFERNKRPKLTWRVLFMAFLCGLFGGSLFQNLYFEALALTSATFVSAIYNLIPAITFILAISCGFERLSLGAPGGKAKVLGTIIGIGGAMLLTFFKGFEIHIWSFHVNLLHPHHHDQNGVVLTPQHAHSELLGVLCALASCFSYAFWLIIQAKMSGEYPCYLSSTSLMSTMGSIQATVFALCMERDFNQWKLGWNVRLLAVSFAGIAASGMVVIVIAWCVRMRGPMFASAFTPLMLVIVAIAASLTLNEKLYLGSVVGALLIVCGLYVVLWGKGKEMRTMTQLVPSSEMSQQHHLDEPIQVVVTNVSDPNHHKISPEQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3387g00016 379 PANTHER WAT1-RELATED PROTEIN 12 347 IPR030184 GO:0016020|GO:0022857
Pral3387g00016 379 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Pral3387g00016 379 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Pral3387g00016 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Pral3387g00016 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3387g00016 Pral-Chr3387 314074 317756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3387g00016 11 355 Nodulin-like Gene Family AT1G25270 42.899 3.82e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3387g00016 - - gmx:100809587 525.783