Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3387g00012 ATGGCGACTTCTAAGGTTGTTACTGCGATTACAGATCTGCCTTATCAGTCTTCTTCTTCTTCCTGTTCTCTTTCTTCAACTCTTGCTGATCTCTCCAAGATCTCTCCTTCCATGAGTATGGATGATCTCCTCAAGCTCATTAACCCTCCCTTTGAACCTGAACCTGGTTCGGCTGCCAATGCTCAATCTGGTGCTGTTGGTTCGATTCCTCGGCAGGGGAGCTTGACGCTTCCGAGGGAATTGGCCGCCAGGTCGGTGGATGAGGTGTGGAAGGAGATGGTGGAGAGGAGTGATCAGATGCTGGTGGGCTCAGGGGTGGTGGGTCGAGAGGAGCAGACTGCTCTGGAGGATTTCTTGATCAAGGCTGGAGCTGTCAGAGAGGAGGACGTCAGAGGCGTTCCTGCTGTTGCGGTGGGTGCCGACGGAGGGAGCCACTGGGCAGACGCAGCGGCGTTCGATGGTGTTGGTGATGGTGGTGCTGGATTCGCAGCGCCCTCAGTGCCGGCGTTTGAAAAAGTAATTGAGGGGCCGGTGGTCGGGGGAGTAGCTGCAGAATCATCGAGAAGGGGAAAGAGGAGGGTTCAAGAGGCACCCATAGACAGGGCCTCGCTTCAGAAACAGAGAAGGATGATAAAAAACAGAGAGTCCGCAGCTAGGTCCAGAGAACGCAAGCAGGCTTACACATCTGAGTTAGAGGCTATGGTAGCACAACTGGAGAAAGAGAACGCGCAGCTAAGAGCGGCTGAGGTTGAGAGAAACAATGAGAGGTTCAGGCAGCTCATGGAGTTCCTGCTTCCAGTTATGGAGAAGGGCAGCGCTAGGCCTCGGATCATGCATCGGAGGGTGAGTTCAGCTCAGTGGTGA 864 0.5451 MATSKVVTAITDLPYQSSSSSCSLSSTLADLSKISPSMSMDDLLKLINPPFEPEPGSAANAQSGAVGSIPRQGSLTLPRELAARSVDEVWKEMVERSDQMLVGSGVVGREEQTALEDFLIKAGAVREEDVRGVPAVAVGADGGSHWADAAAFDGVGDGGAGFAAPSVPAFEKVIEGPVVGGVAAESSRRGKRRVQEAPIDRASLQKQRRMIKNRESAARSRERKQAYTSELEAMVAQLEKENAQLRAAEVERNNERFRQLMEFLLPVMEKGSARPRIMHRRVSSAQW 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3387g00012 287 CDD bZIP_plant_BZIP46 205 246 - -
Pral3387g00012 287 MobiDBLite consensus disorder prediction 51 70 - -
Pral3387g00012 287 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 203 246 IPR004827 GO:0003700|GO:0006355
Pral3387g00012 287 SMART brlzneu 201 263 IPR004827 GO:0003700|GO:0006355
Pral3387g00012 287 Coils Coil 221 260 - -
Pral3387g00012 287 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 208 223 IPR004827 GO:0003700|GO:0006355
Pral3387g00012 287 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 258 IPR043452 GO:0003700|GO:0045893
Pral3387g00012 287 SUPERFAMILY Leucine zipper domain 205 248 IPR046347 GO:0003700|GO:0006355
Pral3387g00012 287 Gene3D - 204 261 - -
Pral3387g00012 287 Pfam bZIP transcription factor 203 255 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3387g00012 Pral-Chr3387 266696 269240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3387g00012 84 287 bZIP Transcription Factor Family AT5G44080 42.534 5.74e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3387g00012 bZIP_1 1.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3387g00012 K14432 - qsa:O6P43_012265 226.483