Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3387g00006 ATGAGCATGCATTGCTTCAAAGCAAATGGTGGCTCCCACTACTATTGTGACTGGGATGGCATATCATGCGATGGCTTAGGAAGAGTTATCTTAATTAACCGACCAAGAATCTATTCACAGCATCCTCAGCTAGCAGATCTCAACTTCACTGAATTAGAAAGACTAAAATACTTAAATCTTTCTAGAATGGGGATAACAGGTATCATTCCAACTCATATAGGAGGCCTTCAAAATCTCAATTATTTGGACTTGTCTTGCAACAACCTTTCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTTGGGGTGGTGACATTAGAAACAATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACCTGTACAGAAAGCATTTTGCTTAAGGATATTCTAGACTCACGTCTCCCTTTGCCATCACAGAAAGATGCAAGAGATATAACTCTTTTGGTGACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCGAAGGCTTTTATCTTCCAGCCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCAAATGAAGATATGCCAATAATGTAA 636 0.3821 MSMHCFKANGGSHYYCDWDGISCDGLGRVILINRPRIYSQHPQLADLNFTELERLKYLNLSRMGITGIIPTHIGGLQNLNYLDLSCNNLSELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSKTCTESILLKDILDSRLPLPSQKDARDITLLVTIALACLNPSPKSRPSMQQVSRRLLSSSLPLAIPFNNISIQHLANEDMPIM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3387g00006 211 Pfam Leucine rich repeat 54 92 IPR001611 GO:0005515
Pral3387g00006 211 SUPERFAMILY L domain-like 12 92 - -
Pral3387g00006 211 Gene3D Transferase(Phosphotransferase) domain 1 93 205 - -
Pral3387g00006 211 ProSiteProfiles Leucine-rich repeat profile. 78 99 IPR001611 GO:0005515
Pral3387g00006 211 Pfam Protein tyrosine and serine/threonine kinase 93 184 IPR001245 GO:0004672|GO:0006468
Pral3387g00006 211 SUPERFAMILY Protein kinase-like (PK-like) 91 191 IPR011009 -
Pral3387g00006 211 Gene3D Ribonuclease Inhibitor 7 92 IPR032675 -
Pral3387g00006 211 PANTHER LEUCINE RICH REPEAT KINASE 2 48 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3387g00006 Pral-Chr3387 176234 179685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3387g00006 85 194 Receptor kinase-like Gene Family AT4G28490 36.975 6.44e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3387g00006 PK_Tyr_Ser-Thr 4.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3387g00006 - - pcin:129298823 218.009