Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3387g00002 ATGGGTGTGATGATATTGGTATTGTTACTATGCTTTGAGATATCTTGCTCCCAGCAGATAAATATGATAGAAGAGGAGAAACGAGCTCTGCTTCAGACCAAATGGTGGGATCTTAGTGATAACTTCTCAGACCCTTGTGATTGGAAAGGCATGTATTGCAATGAATTTGGAAGCGTTATTGAGATGAGTCAGCCAATGATCACTCCAAAGGACCCTCGGCTAGCAGATCTAAACTTCACTGCATTTCCCAACCTACAACATTTGGGTCTTCATGAAATGGGTTTGATAGGTACCATTCCAACTCAAATTGGACTTCTTCATAGTCTTATCTCTTTGAACTTGTCTAGAAACAATCTTAATGGTACCATTCCAACTCAAATTGGAGCTCTTCCAAATCTCACTTACCTAGACTTGTCTTACAACAAGATTATTGGTACCATTCCAACTCAAATTGGACTTCTTCATAGTCTTATCTCTTTGAACTTGTCTAGAAACAATCTTAATGGTACCATTCCAACTCAAATTGAAGCTCTTCCAAATCTCACTTACCTAGACTTGTCTTACAACAAGATTATTGGTACCATTCCAACTCAAATTGGACTTCTTCATAGTCTTATCTCTTTGAACTTGTCTAGAAACAATCTTAATGGTACCATTCCACCTCAAATTGAAGCTCTTGCAAGTCTCACTTATCTAGACTTGTCTAGCAACAATATTATTGGTACCATTCCAACTCGAATTGGACTTCTTCATAGTCTTATCTCTTTGGACTTGTCTAACAACAATCTTAGTGGTACCATTCCACCTCAAATTGAAGCTCTTGCAAGTCTCACTTATCTAGACTTGTCTAACAACAATATTATTGGTACCATTCCAACTCGAATTGGACTTCTTCATAGTCTTATCTCTTTGGACTTGTCTAACAACAATCTTAGTGGGATCATTCCATCATCGATAAAAGATCTTCAATATCACATTCATCTGAACTTGTCTTGTAACAATTTTACTGATGGTGATACAGAATTGCTTTGGCCAGAGAAGATACATAAAGGCTCAAATTCTTTGTTGACAATCATTGTTCCTTTGATAATTTTTCTTGTGATCATATTTGTTGTGGGTTTCATCTTATTTAAATCATTCAAAAAGAACAAGAAATCCATAAGTGAGACAAGAAAAGCCAAAAATAGAGATTTGCTTTCCATATGGAACTACGATGGAAAAATTGCATTTGAAGATATAATTGATGCAACAGAGGACTTTGACATTAAATATTGTATCGGAACTGGTGCCTATGGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATTGTAGCATTAAAAAAGCTTCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAATGAAGTAAAGATGTTGAGTGAAATTCGACATCGCAATATTGTAAAGCTTTATGGTTTTTGTTTACATCATCAGTGCATGTTCCTCATCTATGAATACATGGAAAGAGGAAGCTTTTTTTATGTGTTGAATAATGATGACGATGCTAAAGAGTTGGATTGGAGCAAAAGAGTGAATGCCATCAAAGGAATAGCAAATGCTTTGTTCTACATGCATCATGGTTGTGCTCCTCCAATTATCCATCGAGACATAACAAGTGGTAATGTGTTGTTAAACTCAAACATGGATGCTTTTCTATCTGACTTTGGCACAGCTAGAATCATTGATCCAGATGCATCTAACCAAACTCTTCTAGTTGGTACTTATGGGTACATTGCTCCAGAGCTTGCATACACCTTAGTTGTAACTGAAAAATGTGATGTTTATAGTTTCGGAGTGATGACATTGGAAACAATCATGGGAAGACATCCTGGAGATTTGTTATTGTCTTTGTCAAAGACATGTTATGAAAGCATTTGGCTAAAAGATGTGGTAGACCCACGTATCCCACTGCCATCACGAAAAGATGCACGAGATGTAACTCTTTTGGTAGCAATAGCATTAGCATGCTTGAATCCATCTCCCCAATCTCGGCCATCAATGCAACTAGTGTCTCAAAGGCTTTCATCCTCTAACCTACCATTAGCCATTCCTTTCAATAATATCGCAATCCATCATTTAGTGAATCAAGATGTGTAA 2133 0.3676 MGVMILVLLLCFEISCSQQINMIEEEKRALLQTKWWDLSDNFSDPCDWKGMYCNEFGSVIEMSQPMITPKDPRLADLNFTAFPNLQHLGLHEMGLIGTIPTQIGLLHSLISLNLSRNNLNGTIPTQIGALPNLTYLDLSYNKIIGTIPTQIGLLHSLISLNLSRNNLNGTIPTQIEALPNLTYLDLSYNKIIGTIPTQIGLLHSLISLNLSRNNLNGTIPPQIEALASLTYLDLSSNNIIGTIPTRIGLLHSLISLDLSNNNLSGTIPPQIEALASLTYLDLSNNNIIGTIPTRIGLLHSLISLDLSNNNLSGIIPSSIKDLQYHIHLNLSCNNFTDGDTELLWPEKIHKGSNSLLTIIVPLIIFLVIIFVVGFILFKSFKKNKKSISETRKAKNRDLLSIWNYDGKIAFEDIIDATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRNIVKLYGFCLHHQCMFLIYEYMERGSFFYVLNNDDDAKELDWSKRVNAIKGIANALFYMHHGCAPPIIHRDITSGNVLLNSNMDAFLSDFGTARIIDPDASNQTLLVGTYGYIAPELAYTLVVTEKCDVYSFGVMTLETIMGRHPGDLLLSLSKTCYESIWLKDVVDPRIPLPSRKDARDVTLLVAIALACLNPSPQSRPSMQLVSQRLSSSNLPLAIPFNNIAIHHLVNQDV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3387g00002 710 Pfam Leucine Rich repeats (2 copies) 252 292 IPR025875 -
Pral3387g00002 710 Gene3D Transferase(Phosphotransferase) domain 1 499 692 - -
Pral3387g00002 710 FunFam MDIS1-interacting receptor like kinase 2 499 691 - -
Pral3387g00002 710 ProSiteProfiles Leucine-rich repeat profile. 276 298 IPR001611 GO:0005515
Pral3387g00002 710 Gene3D Ribonuclease Inhibitor 272 343 IPR032675 -
Pral3387g00002 710 ProSiteProfiles Leucine-rich repeat profile. 228 250 IPR001611 GO:0005515
Pral3387g00002 710 Pfam Protein kinase domain 424 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3387g00002 710 Pfam Leucine Rich Repeat 300 321 IPR001611 GO:0005515
Pral3387g00002 710 FunFam Nuclear pore complex protein NUP107 18 165 - -
Pral3387g00002 710 ProSitePatterns Protein kinases ATP-binding region signature. 426 448 IPR017441 GO:0005524
Pral3387g00002 710 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
Pral3387g00002 710 FunFam Leucine-rich repeat receptor protein kinase MSP1 382 498 - -
Pral3387g00002 710 Gene3D Phosphorylase Kinase; domain 1 380 498 - -
Pral3387g00002 710 ProSiteProfiles Leucine-rich repeat profile. 180 202 IPR001611 GO:0005515
Pral3387g00002 710 PRINTS Leucine-rich repeat signature 274 287 - -
Pral3387g00002 710 PRINTS Leucine-rich repeat signature 253 266 - -
Pral3387g00002 710 ProSiteProfiles Protein kinase domain profile. 420 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3387g00002 710 SUPERFAMILY Protein kinase-like (PK-like) 405 686 IPR011009 -
Pral3387g00002 710 Pfam Leucine rich repeat 83 143 IPR001611 GO:0005515
Pral3387g00002 710 Pfam Leucine rich repeat 202 239 IPR001611 GO:0005515
Pral3387g00002 710 Pfam Leucine rich repeat 154 191 IPR001611 GO:0005515
Pral3387g00002 710 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 177 239 - -
Pral3387g00002 710 Gene3D Ribonuclease Inhibitor 21 173 IPR032675 -
Pral3387g00002 710 Gene3D Ribonuclease Inhibitor 174 270 IPR032675 -
Pral3387g00002 710 FunFam Piriformospora indica-insensitive protein 2 243 341 - -
Pral3387g00002 710 ProSitePatterns Tyrosine protein kinases specific active-site signature. 544 556 IPR008266 GO:0004672|GO:0006468
Pral3387g00002 710 SMART LRR_typ_2 226 249 IPR003591 -
Pral3387g00002 710 SMART LRR_typ_2 178 201 IPR003591 -
Pral3387g00002 710 SMART LRR_typ_2 130 154 IPR003591 -
Pral3387g00002 710 SMART LRR_typ_2 202 225 IPR003591 -
Pral3387g00002 710 SMART LRR_typ_2 298 321 IPR003591 -
Pral3387g00002 710 SMART LRR_typ_2 106 129 IPR003591 -
Pral3387g00002 710 SMART LRR_typ_2 274 297 IPR003591 -
Pral3387g00002 710 SMART LRR_typ_2 250 273 IPR003591 -
Pral3387g00002 710 SUPERFAMILY L domain-like 32 335 - -
Pral3387g00002 710 PANTHER LEUCINE RICH REPEAT KINASE 2 178 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3387g00002 Pral-Chr3387 60212 72835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3387g00002 78 592 Receptor kinase-like Gene Family AT4G08850 40.966 7.48e-124 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3387g00002 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3387g00002 - - pcin:129297054 688.337