Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3386g00038 ATGACAAATCCCCACAGCTTATATTTACACTCCAATTTATTCACTACAGGTGGTATCCCTTCGATTTTCCATTTGAGAGATTTACAACATTTTGATGTTTCTCAAAATCAATTAAGTGGTGGCATTCAAGAACAATTAGGAACTTTAAATGATCGCTTTCATGTAGATGTCTCCCGAAATAATTTGAGTGGAAATGTACCGGACATTTGGAACAATTACTTACTTGTTGATGGTAACTTTAGTCACAACAAATTTAATAGAACATTACCATCTAGTATATGCAGTGACCTACCATCATGTAGCATTGATTTGAGCTATAATAGTATCTCTGGTAGCATACCTAGAGAATTTGGTAGGCTACAATACATCAACTTGTCATACAATCTTCTTAGCAGCTATGTTCCAAGTGAAGTTTATAGCTCTTTTCCTCATGACATTTTAAATGGTAATAGAGAATTACTTGGGCCAGAGAAGATACATAAAGGCTCAAAGAAGATACAAAAAGGCTCAAAGTCTTTGCTGAAAATCATTATTCCTTTGACAATTTTTCTTGTCATCATATTTGTTGTGGGTTTCGTCTTATTTGAATCATTCAAAAAGCACAAGAAATCCATAAGTAAGGCAAGAAAAGCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGAAAAATGGCATATGAAGACATCATTGAAGCAACAGAGGACTTTGACATCAAATATTGTATCGGAACCGGTGCTTATGGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATTGTAGCATTGAAAAAACTCCATAGAAGAGAATATGGAAACACAGTTTTGGCCAAGAGTTTTCACAATGAAGTGAAGATGTTGAGTGAAATTCGACATCGTAATATTGTAAAGCTTCATGGTTTTTGTTTGCATAATCAATGTATGTTTCTCATCTATGAATACATGGAAAAAGGAAGCCTTTTTTATGTGTTGAATTATGATGATGAAGCTAAAGAGTTGAATTGGAGTAAGAGAGTGAATGCCATTAAAGGAATAACAAATGCTTTGTTGTATATGCATCATCACTGTGCTCCTCCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAAGATGGAAGCTTTTTTATCAGACTTTGGCACAGCTAGGATCATTGATCCAGATACCTCTAATCAGACTATATTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGTGATGTTTATAGTTTCGGGGTGGTGACATTAGAAACAATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAGGACCTGTACAGAGAGCATTTTGCTAAAGGATATTTTAGACTCACGTCTCCCTTTACCATCACAGAAAGATGCAGGAGATATAACTCTTTTGGTCACAATAGCATTAGCATGCTTGAACCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCTCAAGGGCTTTTATCTTCCAACCTTCCATTAGCAATTCCTTTCAATAATATCTCAATCCAACATTTAGCAAATGAAGATATGCCAATGATACAGTAA 1599 0.3515 MTNPHSLYLHSNLFTTGGIPSIFHLRDLQHFDVSQNQLSGGIQEQLGTLNDRFHVDVSRNNLSGNVPDIWNNYLLVDGNFSHNKFNRTLPSSICSDLPSCSIDLSYNSISGSIPREFGRLQYINLSYNLLSSYVPSEVYSSFPHDILNGNRELLGPEKIHKGSKKIQKGSKSLLKIIIPLTIFLVIIFVVGFVLFESFKKHKKSISKARKAKNGDLFSIWNYDGKMAYEDIIEATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTVLAKSFHNEVKMLSEIRHRNIVKLHGFCLHNQCMFLIYEYMEKGSLFYVLNYDDEAKELNWSKRVNAIKGITNALLYMHHHCAPPIIHRDITSNNILLNSKMEAFLSDFGTARIIDPDTSNQTILVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIMGRHPGDLILSLSRTCTESILLKDILDSRLPLPSQKDAGDITLLVTIALACLNPSPKSRPSMQQVSQGLLSSNLPLAIPFNNISIQHLANEDMPMIQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3386g00038 532 ProSitePatterns Protein kinases ATP-binding region signature. 244 266 IPR017441 GO:0005524
Pral3386g00038 532 FunFam Leucine-rich repeat receptor protein kinase MSP1 200 316 - -
Pral3386g00038 532 PANTHER LEUCINE RICH REPEAT KINASE 2 5 508 - -
Pral3386g00038 532 SUPERFAMILY L domain-like 6 136 - -
Pral3386g00038 532 ProSitePatterns Tyrosine protein kinases specific active-site signature. 362 374 IPR008266 GO:0004672|GO:0006468
Pral3386g00038 532 ProSiteProfiles Protein kinase domain profile. 238 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3386g00038 532 Gene3D Ribonuclease Inhibitor 1 162 IPR032675 -
Pral3386g00038 532 Gene3D Phosphorylase Kinase; domain 1 198 316 - -
Pral3386g00038 532 Pfam Protein kinase domain 242 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3386g00038 532 FunFam MDIS1-interacting receptor like kinase 2 317 509 - -
Pral3386g00038 532 SUPERFAMILY Protein kinase-like (PK-like) 220 502 IPR011009 -
Pral3386g00038 532 Gene3D Transferase(Phosphotransferase) domain 1 317 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3386g00038 Pral-Chr3386 282587 284455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3386g00038 16 410 Receptor kinase-like Gene Family AT4G08850 40.678 2.75e-89 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3386g00038 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3386g00038 - - pcin:129305349 679.478