Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3386g00037 ATGGGTAGATCAGAGGAAGAAGAAGACAAAAAGATGCAGAAAATGGATCTCTCTTTGAAGATTAATCATCATAGTGAAGAACACCAAGGAGCAGATCAGAAGAAGGTAGAAGAAGATGACGATAAGGAAGAAATATTGGCAAAAGCAGTGAAGGTTGACGAACAAGAAGCTCCTCATCATGAAGCCGCCACAGCTGCACAAAATCAGACAGAAGAACGAGTACCAGAAGAAGATGATAATAATGGATCAATGGTACAGAACACTAAAGCAAGAGAGGAGTTAAGTGTGCTACAAGTGGAGACAGATCGCATGAAAGAAGAAAACAAAGTTTTAAAGAAAGTAGTGGAACAAACCATGAAAGACTTCTACGATCTTCAGATGAAACTCGCAATCATCCAGCAGAACCACAGCAAACACAATAAGGATCCTGATCATCAGATCTCTCTGCCACTTCAAAACAGTGGAAATCCTGTTGGCAGTGATGAGAATGATCATATAAAGAAGATTGGATTGGGATTATCACTGAGGTTACAGACAAGTGAAGCGGAAGATGATGAAGCTAAAAGGGAAGGACAGGAGTCTAAGAAGAAGGAATTCTTAGAATTGATGACAAGTAGCTTTGGAACATTATCATCAGTGCAAAACAAAATACCTCGGACTAATATTCATCACGAGTCGCCAGCTTCTGGTCTCAGTAATGCTCATGTTGCTTCTTCTTCTTCGTCTCCAAATAGGAAGGCTAGGGTTTCTGTTAGAGCCAGATGTGCAGCAGCCACTATGAATGATGGGTGCCAATGGAGAAAATATGGACAAAAAATTTCCAAAGGAAATCCATGTCCTCGTGCCTATTATCGTTGCACTTTTGCCCCTGGCTGTCCCGTCAGAAAACAGGTGCAGAGATGCTTAGAGGACATGTCCATTCTAATAACAACGTACGAAGGAACACACAACCATCCTCTTCCCGTAGGTGCCACAGCCATGGCTTCCACTGCTTATGCAGCTCATTACAATAACAATAATACCTTTCTCCCATCACCAAACCCTAATATTGACCCTTCCAAAGGACTCATCCTTGATCTAACTTCAACCCCCTTATCTTCTTCATCATCATCACAGCCCAGATTTTCTTGGACACCAAACACAACCAATAGTTTTCCCAGTTCTGTACAAGAAAATAATCACAGTGTTTCTGCGATTGCTTCAGATCCTAAGTTTAGGGTTGCTGTGGCGGCTGCGATAACATCCATTATTAATAACAAAGACATCAATCATAGTACTGTTACTAATAATAATAATGATAATAATCCTTCAGCGGGGACAACGTTGTCGACGGCTTCTTTTGTTGGTGCTGGCAATAATATTAATAATGGAAGAAGCTCTGGTAGTAGCAGCAGTAACAGATGGATCTTAGAGTCCCTCTCATCATCACCAAAAGGGAAGACCCAGTTGTAA 1452 0.4125 MGRSEEEEDKKMQKMDLSLKINHHSEEHQGADQKKVEEDDDKEEILAKAVKVDEQEAPHHEAATAAQNQTEERVPEEDDNNGSMVQNTKAREELSVLQVETDRMKEENKVLKKVVEQTMKDFYDLQMKLAIIQQNHSKHNKDPDHQISLPLQNSGNPVGSDENDHIKKIGLGLSLRLQTSEAEDDEAKREGQESKKKEFLELMTSSFGTLSSVQNKIPRTNIHHESPASGLSNAHVASSSSSPNRKARVSVRARCAAATMNDGCQWRKYGQKISKGNPCPRAYYRCTFAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYAAHYNNNNTFLPSPNPNIDPSKGLILDLTSTPLSSSSSSQPRFSWTPNTTNSFPSSVQENNHSVSAIASDPKFRVAVAAAITSIINNKDINHSTVTNNNNDNNPSAGTTLSTASFVGAGNNINNGRSSGSSSSNRWILESLSSSPKGKTQL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3386g00037 483 MobiDBLite consensus disorder prediction 179 196 - -
Pral3386g00037 483 MobiDBLite consensus disorder prediction 222 248 - -
Pral3386g00037 483 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3386g00037 483 MobiDBLite consensus disorder prediction 177 196 - -
Pral3386g00037 483 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 74 432 IPR044810 GO:0003700
Pral3386g00037 483 MobiDBLite consensus disorder prediction 423 483 - -
Pral3386g00037 483 MobiDBLite consensus disorder prediction 364 390 - -
Pral3386g00037 483 Coils Coil 87 107 - -
Pral3386g00037 483 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3386g00037 483 Gene3D WRKY domain 245 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3386g00037 483 MobiDBLite consensus disorder prediction 222 247 - -
Pral3386g00037 483 Pfam WRKY DNA -binding domain 261 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3386g00037 483 SUPERFAMILY WRKY DNA-binding domain 254 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3386g00037 483 MobiDBLite consensus disorder prediction 1 60 - -
Pral3386g00037 483 FunFam probable WRKY transcription factor 31 245 322 - -
Pral3386g00037 483 MobiDBLite consensus disorder prediction 1 94 - -
Pral3386g00037 483 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3386g00037 Pral-Chr3386 244305 248873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3386g00037 65 402 WRKY Transcription Factor Family AT1G68150 41.690 4.39e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3386g00037 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3386g00037 - - pcin:129306987 420.239