Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3386g00036 ATGGGTAGATCAGAGGAAGAAGAAGACAAAAAGATGCAGAAAATGGATCTCTCTTTGAAGATTAATCATCATAGTGAAGAACACCAAGGAGCAGATCAGAAGAAGGTAGAAGAAGATGACGATAAGGAAGAAATATTGGCAAAAGCAGTGAAGGTTGACGAACAAGAAGCTCCTCATCATGAAGCCGCCACAGCTGCACAAAATCAGACAGAAGAACGAGTACCAGAAGAAGATGATAATAATGGATCAATGGTACAGAACACTAAAGCAAGAGAGGAGTTAAGTGTGCTACAAGTGGAGACAGATCGCATGAAAGAAGAAAACAAAGTTTTAAAGAAAGTAGTGGAACAAACCATGAAAGACTTCTACGATCTTCAGATGAAACTCGCAATCATCCAGCAGAACCACAGCAAACACAATAAGATCTCTCTGCCACTTCAAAACAGTGGAAATCCTGTTGGCAGTGATGAGAATGATCATATAAAGAAGATTGGATTGGGATTATCACTGAGGTTACAGACAAGTGAAGCGGAAGATGATGAAGCTAAAAGGGAAGGACAGGAGTCTAAGAAGAAGGAATTCTTAGAATTGATGACAAGTAGCTTTGGAACATTATCATCAGTGCAAAACAAAATACCTCGGACTAATATTCATCACGAGTCGCCAGCTTCTGGTCTCAGTAATGCTCATGTTGCTTCTTCTTCTTCGTCTCCAAATAGGAAGGCTAGGGTTTCTGTTAGAGCCAGATGTGCAGCAGCCACTATGAATGATGGGTGCCAATGGAGAAAATATGGACAAAAAATTTCCAAAGGAAATCCATGTCCTCGTGCCTATTATCGTTGCACTTTTGCCCCTGGCTGTCCCGTCAGAAAACAGGTGCAGAGATGCTTAGAGGACATGTCCATTCTAATAACAACGTACGAAGGAACACACAACCATCCTCTTCCCGTAGGTGCCACAGCCATGGCTTCCACTGCTTATGCAGCTCATTACAATAACAATAATACCTTTCTCCCATCACCAAACCCTAATATTGACCCTTCCAAAGGACTCATCCTTGATCTAACTTCAACCCCCTTATCTTCTTCATCATCATCACAGCCCAGATTTTCTTGGACACCAAACACAACCAATAGTTTTCCCAGTTCTGTACAAGAAAATAATCACAGTGTTTCTGCGATTGCTTCAGATCCTAAGTTTAGGGTTGCTGTGGCGGCTGCGATAACATCCATTATTAATAACAAAGACATCAATCATAGTACTGTTACTAATAATAATAATGATAATAATCCTTCAGCGGGGACAACGTTGTCGACGGCTTCTTTTGTTGGTGCTGGCAATAATATTAATAATGGAAGAAGCTCTGGTAGTAGCAGCAGTAACAGATGGATCTTAGAGTCCCTCTCATCATCACCAAAAGGGAAGACCCAGTTGTAA 1437 0.412 MGRSEEEEDKKMQKMDLSLKINHHSEEHQGADQKKVEEDDDKEEILAKAVKVDEQEAPHHEAATAAQNQTEERVPEEDDNNGSMVQNTKAREELSVLQVETDRMKEENKVLKKVVEQTMKDFYDLQMKLAIIQQNHSKHNKISLPLQNSGNPVGSDENDHIKKIGLGLSLRLQTSEAEDDEAKREGQESKKKEFLELMTSSFGTLSSVQNKIPRTNIHHESPASGLSNAHVASSSSSPNRKARVSVRARCAAATMNDGCQWRKYGQKISKGNPCPRAYYRCTFAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYAAHYNNNNTFLPSPNPNIDPSKGLILDLTSTPLSSSSSSQPRFSWTPNTTNSFPSSVQENNHSVSAIASDPKFRVAVAAAITSIINNKDINHSTVTNNNNDNNPSAGTTLSTASFVGAGNNINNGRSSGSSSSNRWILESLSSSPKGKTQL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3386g00036 478 ProSiteProfiles WRKY domain profile. 250 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3386g00036 478 SUPERFAMILY WRKY DNA-binding domain 249 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3386g00036 478 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 74 427 IPR044810 GO:0003700
Pral3386g00036 478 MobiDBLite consensus disorder prediction 418 478 - -
Pral3386g00036 478 MobiDBLite consensus disorder prediction 359 385 - -
Pral3386g00036 478 Pfam WRKY DNA -binding domain 256 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3386g00036 478 MobiDBLite consensus disorder prediction 174 191 - -
Pral3386g00036 478 MobiDBLite consensus disorder prediction 217 243 - -
Pral3386g00036 478 FunFam probable WRKY transcription factor 31 240 317 - -
Pral3386g00036 478 Coils Coil 87 107 - -
Pral3386g00036 478 SMART WRKY_cls 255 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3386g00036 478 MobiDBLite consensus disorder prediction 172 191 - -
Pral3386g00036 478 MobiDBLite consensus disorder prediction 1 87 - -
Pral3386g00036 478 MobiDBLite consensus disorder prediction 1 60 - -
Pral3386g00036 478 Gene3D WRKY domain 240 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3386g00036 478 MobiDBLite consensus disorder prediction 217 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3386g00036 Pral-Chr3386 244305 248873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3386g00036 61 397 WRKY Transcription Factor Family AT1G68150 41.525 1.23e-71 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3386g00036 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3386g00036 - - pcin:129306987 411.379