Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3386g00035 ATGGACGCCAAGCGCCGGAAGCCCTTGCAGACCAAGCTTGAGCGCCGAAACGCCATGAAGAACATAGATTACCAAGCTCCCACCACCTCATACGACGAAGTCGCTTCTCTTGACCTTTTACGCCAAACCAGCTACAGGTTAAAGGGCTTCGACGATGAGGTTGACCTTCTTTTTCGCGGTTTAGGACTTTCTGGACCCGAAGACTTTGAAATCCCAACTGCAGAATGGAGAGCCCGAGAGGCTCGCTCTATCCATAGTGATAGTAACCCACTGATTGAAAAAGCACGAGATGAAATTCAAATTCCTGCTGAATTTCAACGCCGGGTTGAAATTAATAGTGATATAGAGCTAAAAGGTAAGAAATTGCAAGCTGGGATGGAGAGGAAGATTACTGTTGCTTATTCTAATTCGAATGCTTTGGGGTCCAATCAGGATGGTGGTAGAGTAATCAAAAGTGTTAGGCCTTCTGTTCTATTGCCTCCGCCGCCGGGGATGGTGCGGCGGCCAATCGCTAACAGGGTTACTGATTTTCCAATTCAAGTTAGACGCATTAGGTCTACTGGCGAAGATGAAGTGAGGGTCCCTAAAGGAAATGAGGAGGCTGTTGACGGAGATGAAGATGGTGGTGGTGGTGATAAGGGTACTGGTGTGGTTGATGAGTCAGTTCTTAACGTCTCACCATATGGGTCATTTAGATGCGCTTTCTCCTGTTGGCAAAAGGGAGAGATTCTGGGAAAGGGGTCATTTGGTACGGTTTATGAAGGCTTTACGAGTGTGAGCAGTGATGGGTTCTTCTTTGCTGTGAAGGAGGTTTCTTTGCTGGATGAAGGAAGTCAGGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTCTTGAGTCGGTTTGAACATGAGAACATAGTTCGATATCTTGGCTCAGATAAGGATGAAAGTAAGCTATATATCTTCCTTGAGCTTTTAACAAAAGGGTCCTTGGCAAATCTCTATCGAAAGTATCATTTAAGGGATTCTCAAGTTTCTGCATACACACGGCAGATTTTAAGTGGCTTGAAGTATCTTCATGATTGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAGCGGATCAGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACTAAGTTTAATGACCTTAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTAAATTTAAAGAGCCGCGGCTATGGTCCGGCAGCCGATATATGGAGCCTAGGATGTACAGTTTTGGAGATGTTGACTCGACAGTCTCCTTACTCTGAATTGGAAGGGATGCAAGCATTATTTCGGATTGGCAGGGGCGAACCTCCACCAATTCCTGAATCAATATCGAAAGATGCTCGAGATTTTATTCAAAGATGCATACAAGTTAACCCTGAAAAACGGCCAACCGCAGCTATATTGTTGGAACATAAATTTGTAAAAAGAAAATTCTTGCCTCCAATAATTCCTGCTCCTCCACTTGTTAATGATTTTCGGTCTTGA 1545 0.4453 MDAKRRKPLQTKLERRNAMKNIDYQAPTTSYDEVASLDLLRQTSYRLKGFDDEVDLLFRGLGLSGPEDFEIPTAEWRAREARSIHSDSNPLIEKARDEIQIPAEFQRRVEINSDIELKGKKLQAGMERKITVAYSNSNALGSNQDGGRVIKSVRPSVLLPPPPGMVRRPIANRVTDFPIQVRRIRSTGEDEVRVPKGNEEAVDGDEDGGGGDKGTGVVDESVLNVSPYGSFRCAFSCWQKGEILGKGSFGTVYEGFTSVSSDGFFFAVKEVSLLDEGSQGKQSIFQLQQEISLLSRFEHENIVRYLGSDKDESKLYIFLELLTKGSLANLYRKYHLRDSQVSAYTRQILSGLKYLHDCNVVHRDIKCANILVDASGSVKLADFGLAKATKFNDLRSSKGSPYWMAPEVVNLKSRGYGPAADIWSLGCTVLEMLTRQSPYSELEGMQALFRIGRGEPPPIPESISKDARDFIQRCIQVNPEKRPTAAILLEHKFVKRKFLPPIIPAPPLVNDFRS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3386g00035 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Pral3386g00035 514 SUPERFAMILY Protein kinase-like (PK-like) 222 508 IPR011009 -
Pral3386g00035 514 MobiDBLite consensus disorder prediction 188 214 - -
Pral3386g00035 514 Pfam Protein kinase domain 239 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3386g00035 514 SMART serkin_6 238 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3386g00035 514 ProSitePatterns Protein kinases ATP-binding region signature. 244 269 IPR017441 GO:0005524
Pral3386g00035 514 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 163 497 - -
Pral3386g00035 514 ProSiteProfiles Protein kinase domain profile. 238 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3386g00035 514 MobiDBLite consensus disorder prediction 188 213 - -
Pral3386g00035 514 Gene3D Transferase(Phosphotransferase) domain 1 236 502 - -
Pral3386g00035 514 FunFam Mitogen-activated protein kinase 1, putative, expressed 236 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3386g00035 Pral-Chr3386 230809 236923 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3386g00035 12 496 MAP Kinase Kinase Kinase AT4G08500 45.167 7.02e-135 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral3386g00035 Pkinase 4.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3386g00035 K13414 - qsa:O6P43_012258 513.842