Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3386g00020 ATGTGGCGTAATGGACCAACAGAGAAGCCGGTTCTGTGCAATGCATGTGGATCAAGGTATAGGTTGTGGGGATGCCTAGACAGCTATATCCCCAAGCATGCCCTTCCCCCGGTGAAGCCGAGAAATTTATATAGCCCAGCCAGTGATCATCTTATCAAGCATAACCCCAAACAATTTTCCTTGGGCAATTCTGTCATGTCTCCCCTAGGTAAGTTGAACCCAGCAAGCTCATGGACTTCTTCACCAATCCCTTCGAGGAAAAGATCAGAGACGTTGCACGAGAGGTTGACAGAAATGGACAGGTTCAAACTGCAGATTCAGAATTCTTGGAAACAAGATAGCAATGGGAAGAAGAAAAAGAAGCAGTCTTCATCATCTGCTGCCTCTTCTTCTTCTTCCTCCTCCTCCCTACCAGAAGAAGATGTTTTAATAACTCAGAAATTGACCAACCATATGATACCCAGTAATGAGATAGGACTTGGAGGCATGCTTCTTAACCTAGATTAG 507 0.4497 MWRNGPTEKPVLCNACGSRYRLWGCLDSYIPKHALPPVKPRNLYSPASDHLIKHNPKQFSLGNSVMSPLGKLNPASSWTSSPIPSRKRSETLHERLTEMDRFKLQIQNSWKQDSNGKKKKKQSSSSAASSSSSSSSLPEEDVLITQKLTNHMIPSNEIGLGGMLLNLD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3386g00020 168 MobiDBLite consensus disorder prediction 71 86 - -
Pral3386g00020 168 MobiDBLite consensus disorder prediction 103 139 - -
Pral3386g00020 168 MobiDBLite consensus disorder prediction 71 91 - -
Pral3386g00020 168 MobiDBLite consensus disorder prediction 121 139 - -
Pral3386g00020 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 1 27 - -
Pral3386g00020 168 PANTHER OSJNBB0038F03.10 PROTEIN 2 166 IPR044589 -
Pral3386g00020 168 Gene3D - 1 45 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3386g00020 Pral-Chr3386 129555 130666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3386g00020 1 63 C2C2-Gata Transcription Factor Family AT4G17570 50.794 1.11e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral3386g00020 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3386g00020 - - ccaj:109803880 91.2781