Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3385g00019 ATGGAGACGAATTTCAGTTCTTATTATAATCTTCACTGGCTCTCTAGCTTGAAGAAAAGTGATAGGAAACACCATAATGGTCATTCAGAGAAGCCTGATCATGTTGAAGAAGATAATATGTCTCCATCTTTCCATCTACGGAATATTTCAAAACTCATCCTGCCACCACTTGGTGCTTCTAGTTACAACCAGAACCCAGTACAAACAAAAGGGTGGATCATATCTCCAATGGATTCAAGATACAGGTATTGGCAGAGTTTGATGGTGCTTCTGGTGGCTTATTCAGCATGGGTTTATCCCTTTGAAGTTGCTTTCCTGCACAGTTCTCCAAATAGGGAAATGTTCTTAGTGGACAATGTTGTTGATCTTTTCTTCGCTGTCGACATTGTTATCACATTCTTCGTAGCTTTCATTGATCGAAGAACTCAACTATTGGTCAGAGACTCAAAAAAGATTGCTGCGAGGTACTTATCAACTTGGTTCGTGATGGATGTGGCATCAACTATTCCATATGAGGCAATAAGTTACGTAATCACAGGCAAACACAAGGTAGGTCTTGCTTGCTACCTTCTGGGCATGCTTAGATTTTGGCGACTCAGAAGAATGAAGCAATTTTTTACCAGGTTAGAGAAAAACATTAGATTCAGCTACTTCTGGGTCAGATGTGCAAGGCTTCTCTTGGTAACATTATTTTCGGTTCATTGTGCTGGGTGCCTCTACTATCTCCTAGCTGATCGGTATCCTCGCCAAGGAAAGACATGGATTGGGGCAGTGATCCCAAATTTCAGAGAGACAAGCCTTTGGATCAGATACATTTCAGCCATGTACTGGTCCATCACCACCATGACCACTGTTGGTTATGGTGACCTACATGCTGTCAACACTGTTGAAATGATATTCATTATTTTTTACATGCTCTTCAATCTTGGCCTCACTGCTTACTTGATTGGTAATATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACTATGGAGTTTAGAAATAGCATTGAAGCTGCATCAAGTTTTGTGGGGCGAAATCGATTGCCTGCTAGGTTGAAAGAGCAGATTCTGGCCTACATGTGTTTGAGATTTAAGGCAGAGAGCTTAAATCAATATCAGCTTATTGAACAACTACCAAAGTCCATTTGCACAAGCATCTGCCAGCATTTGTTTTTGCCAACGGTGGAGAAAGTCTATCTGTTCAAGGATGTCTCTAGGGAAATTCTCTTGTCTATGGTTGCGAAAATGAAGGCAGAGTATCTACCACCTAGAGAGGATGTTATTATGCAAAATGAAGCACCAGATGATGTTTACATCATAGTGTCAGGAGAAGTAGAGATCATTGATTGTGTAATGGAGAAAGAGAGAACTTTAGGGACTTTGCTAACAGGGGACATGTTTGGAGAAGTTGGTGCACTTTGTTGCAAACCTCAATACTTTACCTATAGAACCAAAACTCTCACACAGGTTTTGAGGCTCAAAACCAATGCTCTAATTGAAGCAATGCAAATTAAAAAGGAAGACAATATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGCAAATAAAAGATATAAGTATTAGAGATTTAATGGTGGAGAGTGGAGAAGAAGAGGATCCAAACATGGCTGTGAACTTATTAACTGTGGCCAGCACAGGCAATGCAGCTTTTCTTGAAGAGCTTCTCAAGGCAGGTTTGGATCCTGACATTGGGGACTCAAAAGGGAAAACCCCCTTGCACATAGCTGCATCAAATGGGCATGAAGAGTGTGTAAAAGTCTTGCTTAGGCACGCATGCAACATACACATAAGAGACTTCAATGGTAACACTGCCTTATGGGATGCCATAGCATCAAAACATCACTCCATATTCAGAATCCTCTACCAACTTGCTTGCCTCTCTGATCCACAAACAGGAGGTGATCTCCTGTGTACAGCAGCAGAAAGAAATGATCTAACAGTAATGAGTGAGCTTTTGAAACAAGGATTGAACATAGACTCGAAAGATCGCCATGGTATGACAGCAACCCAAGTAGCCATTGCAGAGAATCATGTGGAAATGGTTCAGCTGCTTGTCATGAATGGAGCAGATGTTTCTGACATAAGAACTCATAATGTTTCTGCTTCTGCTTTGAATGAAATGCTGCGAAAGCGTGAGACCGGGCATCGGATCACAGTACATGAGGCCACACCTAGTGAGCATGTAGTAAGGGGAGATGAAAGTGAGCAGGATGAGGAGGAGCAGAGTTGGGGAAGATCTAGCAAACCTAGCTTCCCAAGAGTGAGTATATATAGAGGCCACCCTGTAAACAGAAGAAACAAAAATTGCAAGGAAGCTGGGAGGCTCATAAGGTTTCCTGATTCACTTGAGGAGCTCAAGAGAATTGCAGGTGAGAAGTTTGGGTTTGAAGCAAAAGACGCAATGGTGACAAATGAAGAAGGAGCAGAAATAGACTCTGTTGAAGTGATTAGAGACAATGATAAACTTTTCATTGTTGGATAG 2508 0.4143 METNFSSYYNLHWLSSLKKSDRKHHNGHSEKPDHVEEDNMSPSFHLRNISKLILPPLGASSYNQNPVQTKGWIISPMDSRYRYWQSLMVLLVAYSAWVYPFEVAFLHSSPNREMFLVDNVVDLFFAVDIVITFFVAFIDRRTQLLVRDSKKIAARYLSTWFVMDVASTIPYEAISYVITGKHKVGLACYLLGMLRFWRLRRMKQFFTRLEKNIRFSYFWVRCARLLLVTLFSVHCAGCLYYLLADRYPRQGKTWIGAVIPNFRETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASSFVGRNRLPARLKEQILAYMCLRFKAESLNQYQLIEQLPKSICTSICQHLFLPTVEKVYLFKDVSREILLSMVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEIIDCVMEKERTLGTLLTGDMFGEVGALCCKPQYFTYRTKTLTQVLRLKTNALIEAMQIKKEDNIQILKNFLQHFKQIKDISIRDLMVESGEEEDPNMAVNLLTVASTGNAAFLEELLKAGLDPDIGDSKGKTPLHIAASNGHEECVKVLLRHACNIHIRDFNGNTALWDAIASKHHSIFRILYQLACLSDPQTGGDLLCTAAERNDLTVMSELLKQGLNIDSKDRHGMTATQVAIAENHVEMVQLLVMNGADVSDIRTHNVSASALNEMLRKRETGHRITVHEATPSEHVVRGDESEQDEEEQSWGRSSKPSFPRVSIYRGHPVNRRNKNCKEAGRLIRFPDSLEELKRIAGEKFGFEAKDAMVTNEEGAEIDSVEVIRDNDKLFIVG 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3385g00019 835 ProSiteProfiles Ankyrin repeat profile. 576 608 IPR002110 GO:0005515
Pral3385g00019 835 SMART ANK_2a 576 605 IPR002110 GO:0005515
Pral3385g00019 835 SMART ANK_2a 673 702 IPR002110 GO:0005515
Pral3385g00019 835 SMART ANK_2a 494 526 IPR002110 GO:0005515
Pral3385g00019 835 SMART ANK_2a 609 639 IPR002110 GO:0005515
Pral3385g00019 835 SMART ANK_2a 543 572 IPR002110 GO:0005515
Pral3385g00019 835 SMART ANK_2a 640 669 IPR002110 GO:0005515
Pral3385g00019 835 Pfam Cyclic nucleotide-binding domain 421 504 IPR000595 -
Pral3385g00019 835 FunFam Potassium channel KAT3 83 325 - -
Pral3385g00019 835 ProSiteProfiles cAMP/cGMP binding motif profile. 401 520 IPR000595 -
Pral3385g00019 835 FunFam Potassium channel KAT2 389 525 - -
Pral3385g00019 835 PRINTS Ankyrin repeat signature 689 703 IPR002110 GO:0005515
Pral3385g00019 835 PRINTS Ankyrin repeat signature 577 592 IPR002110 GO:0005515
Pral3385g00019 835 ProSiteProfiles Ankyrin repeat profile. 640 672 IPR002110 GO:0005515
Pral3385g00019 835 ProSiteProfiles Ankyrin repeat region circular profile. 673 701 - -
Pral3385g00019 835 SUPERFAMILY cAMP-binding domain-like 328 519 IPR018490 -
Pral3385g00019 835 Pfam Ankyrin repeats (3 copies) 552 630 IPR002110 GO:0005515
Pral3385g00019 835 Pfam Ankyrin repeats (3 copies) 631 701 IPR002110 GO:0005515
Pral3385g00019 835 SUPERFAMILY Voltage-gated potassium channels 76 324 - -
Pral3385g00019 835 Gene3D Jelly Rolls 368 542 IPR014710 -
Pral3385g00019 835 ProSiteProfiles Ankyrin repeat region circular profile. 576 607 - -
Pral3385g00019 835 Pfam Ion transport protein 82 330 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral3385g00019 835 SUPERFAMILY Ankyrin repeat 508 709 IPR036770 -
Pral3385g00019 835 CDD CAP_ED 401 514 IPR000595 -
Pral3385g00019 835 Gene3D - 82 324 - -
Pral3385g00019 835 ProSiteProfiles Ankyrin repeat profile. 673 705 IPR002110 GO:0005515
Pral3385g00019 835 MobiDBLite consensus disorder prediction 733 774 - -
Pral3385g00019 835 PRINTS EAG/ELK/ERG potassium channel family signature 118 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3385g00019 835 PRINTS EAG/ELK/ERG potassium channel family signature 297 308 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3385g00019 835 PRINTS EAG/ELK/ERG potassium channel family signature 315 324 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3385g00019 835 PRINTS EAG/ELK/ERG potassium channel family signature 129 138 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3385g00019 835 PRINTS EAG/ELK/ERG potassium channel family signature 271 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3385g00019 835 PANTHER POTASSIUM CHANNEL AKT1 45 834 IPR045319 GO:0005249|GO:0006813
Pral3385g00019 835 ProSiteProfiles KHA domain profile. 762 835 IPR021789 -
Pral3385g00019 835 Gene3D - 545 721 IPR036770 -
Pral3385g00019 835 MobiDBLite consensus disorder prediction 733 753 - -
Pral3385g00019 835 Pfam KHA, dimerisation domain of potassium ion channel 761 833 IPR021789 -
Pral3385g00019 835 SMART cnmp_10 401 518 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3385g00019 Pral-Chr3385 152693 161696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3385g00019 20 581 Ion Channels AT4G22200 72.968 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3385g00019 K21867 - gmx:100798422 1311.98