Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3383g00012 ATGCTGGGAGCCAACGACGGGCTCGTCTCCGTCGCCTCTATCATGATGGGCGTTGGAGCCGTGAAGGAAGACGTCACAGCCATGGTTCTCTCCGGGTTCGCCGGGCTAGTCGCCGGAGCTTGCAGCATGGCGATAGGCGAGTTTGTGTCCGTGTACACACAGTACGACATAGAGAAGGAACAACTGAAAAGAGAAGAAGAAGAAGGTGGGGACAGTAGTGATAAGAAAGAGAAGCTGCCAAGTCCATATCAGGCAGCGCTAGCTTCAGCCCTAGCGTTTTCTGTAGGAGCAGTGATTCCATTGGTGGGAGCTATGTTCATAAAAGACTATAAAATTAGGTTAAGTGTGGTTGCTGCAATGGTGAGCTTGGCCTTGCTTGTGTTTGGAGGCATAGGAGCAGTGCTTGGTCGTACTCCTGTGAAGAAGTCGTGCATTAGGGTTCTTATTGGAGGCTGGGCTGCCATGGCCATAACTTTTGGCCTCACCAAGTTGATTGGATTCACTCAGCCTTGA 513 0.5127 MLGANDGLVSVASIMMGVGAVKEDVTAMVLSGFAGLVAGACSMAIGEFVSVYTQYDIEKEQLKREEEEGGDSSDKKEKLPSPYQAALASALAFSVGAVIPLVGAMFIKDYKIRLSVVAAMVSLALLVFGGIGAVLGRTPVKKSCIRVLIGGWAAMAITFGLTKLIGFTQP 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3383g00012 170 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 2 165 IPR008217 GO:0005384|GO:0030026
Pral3383g00012 170 Pfam VIT family 75 162 IPR008217 GO:0005384|GO:0030026
Pral3383g00012 170 Pfam VIT family 1 74 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3383g00012 Pral-Chr3383 255630 256193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3383g00012 1 166 Nodulin-like Gene Family AT3G43660 69.277 8.69e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3383g00012 K22736 - gmx:100802489 248.44