Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3383g00007 ATGGCAGATAACACAGTGAATCTTCCTCCTGGATTTAGATTCTATCCAACTGATGAAGAACTGATCGTTCATTTCCTTCACAGGAAAGCTTCGCTCCTACCTTGCCATCCTGATGTCATCCCTGACCTTGAGCTCTATCCCTACGATCCATGGGACCTCCAAGGGAAGGCTCTAGGGGAGGGAAACCAATGGTATTACTATAGCAGGAGGACTCAGAATAGGGTTACAGTGAATGGGTATTGGAAAGCAATGGGAATGGAAGAGGCAGTAATTGCAGCAAGCAGTAATAAGAGAGTTGGAATGAAGAAATATTTTGTGTTTTTTGAAGGAGAACATCCCAATTCCGGCATTAAAACCAACTGGGTAATGCAAGAGTATCGTCTTTCAGATTCTTCTTCTTCCTCCTCTAGCAGATCGCCATCGTCATCGTCCTCAAGAAGAAAATCTCAACCAAAACCAGATTACAGAAAGTGGGTGATTTGTCGAGTTTATGAACGGGATAATGATGATGACGATGAAGATGGTGGTGATAATGGAATAGAACTGTCTTGTTTGGATGAAGTGTTCTTGTCAATGGATGATCTTGAAGAAATAAGCTTACCAGTTAGTTAG 612 0.4216 MADNTVNLPPGFRFYPTDEELIVHFLHRKASLLPCHPDVIPDLELYPYDPWDLQGKALGEGNQWYYYSRRTQNRVTVNGYWKAMGMEEAVIAASSNKRVGMKKYFVFFEGEHPNSGIKTNWVMQEYRLSDSSSSSSSRSPSSSSSRRKSQPKPDYRKWVICRVYERDNDDDDEDGGDNGIELSCLDEVFLSMDDLEEISLPVS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3383g00007 203 PANTHER NAC TRANSCRIPTION FACTOR 56 8 173 - -
Pral3383g00007 203 FunFam NAC domain-containing protein 104 17 169 - -
Pral3383g00007 203 SUPERFAMILY NAC domain 4 165 IPR036093 GO:0003677|GO:0006355
Pral3383g00007 203 Pfam No apical meristem (NAM) protein 9 128 IPR003441 GO:0003677|GO:0006355
Pral3383g00007 203 MobiDBLite consensus disorder prediction 130 153 - -
Pral3383g00007 203 MobiDBLite consensus disorder prediction 130 148 - -
Pral3383g00007 203 Gene3D NAC domain 17 171 IPR036093 GO:0003677|GO:0006355
Pral3383g00007 203 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3383g00007 Pral-Chr3383 216574 217511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3383g00007 1 168 NAC Transcription Factor Family AT1G61110 40.331 9.49e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3383g00007 NAM 4.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3383g00007 - - gmx:100170712 303.523