Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3383g00004 ATGACAGAGGACAAGAAATTCCCTGTTTTTATGGATGTCCGTATATATGAGCGCCCCCATCAAAGGATGGTTTTTGAGCTATTCTATGACATTGCCCCCTTCACTGCAGAAAACTTCCGTGCTCTATGTACAGGAGAAAAGGGAGTCAGTCCAAAAACTAGGAAGCGTCTGCGTTACCCAAATACTTTCTTTCAGAAGGTTAGGAAAGGTGGCTCCTATGTGAAAGGGGGTGTTTTCGGTTGGGAAACTAGGGAATGTGTAGAAAGTATCTATGGTCCTCATTTCCCAGTGCTCGAGTCAAATAACCTCAAGCACGACAAAGAAGGGCTTCTATCCATGCCAATAGGAGATCTAGAAGCATGTCGTTCTCACTTTTTGATCACATTGAAAGCTGATCAAAGCCTTGACAGTACTCATGTGGTGTTCGGAAAGCTTGTGCAAGGGCTGGCTACATTAAGGGATATTGGAAAGTATTGTTCCAGCATGCCAATTGAAATTATGAATTGTGGCATGTCGTATAATGCTGATTATGTTCCTCCTGGTGTGATTGTGAGGCCTTGTCAGCCTCGAAGAGCAAGTAAAAACCATGCTAAGGGAATGGGAGAAGAGAGGGCAAGAAGGGACATCTCTTCCAAAACCAAAAGGTTCAAAATCTCTTCATAA 663 0.4344 MTEDKKFPVFMDVRIYERPHQRMVFELFYDIAPFTAENFRALCTGEKGVSPKTRKRLRYPNTFFQKVRKGGSYVKGGVFGWETRECVESIYGPHFPVLESNNLKHDKEGLLSMPIGDLEACRSHFLITLKADQSLDSTHVVFGKLVQGLATLRDIGKYCSSMPIEIMNCGMSYNADYVPPGVIVRPCQPRRASKNHAKGMGEERARRDISSKTKRFKISS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3383g00004 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Pral3383g00004 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pral3383g00004 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 IPR002130 GO:0000413|GO:0003755
Pral3383g00004 220 MobiDBLite consensus disorder prediction 188 220 - -
Pral3383g00004 220 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 13 169 IPR002130 GO:0000413|GO:0003755
Pral3383g00004 220 Gene3D - 1 172 IPR029000 -
Pral3383g00004 220 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 155 IPR002130 GO:0000413|GO:0003755
Pral3383g00004 220 SUPERFAMILY Cyclophilin-like 9 172 IPR029000 -
Pral3383g00004 220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 170 - -
Pral3383g00004 220 MobiDBLite consensus disorder prediction 195 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3383g00004 Pral-Chr3383 198557 201383 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3383g00004 16 152 U-box Gene Family AT5G67530 32.168 6.12e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3383g00004 K09566 - gmx:100785820 169.474