Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00074 ATGGGTGTGATGATATTGGTATTGTTACTATGCTTTGAGATATCTTGCTCCCAGCAGATAAATATGATAGAAGAGGAGAAACGAGCTCTGCTTCAGACCAAATGGTGGGATCTTAGTGATAACTTCTCAGACCCTTGTGATTGGAAAGGCATGTATTGCAATGAATTTGGAAGCGTTATTGAGATGAGTCAGCCAATGATCACTCCAAAGGACCCTCGGCTAGCAGATCTAAACTTCACTGCATTTCCCAACCTACAACATTTGGGTCTTCATGAAATGGGTTTGATAGGTACCATTCCACCTCAAATTGAAGCTCTTGCAAGTCTCACTTATCTAGACTTGTCTCACAACAATATTCTTGGTATCATTCCAACTCAAATTGGAGCTCTTCCAAATCTCACTTACGTAGACTTGTCTTACAACAAGATTATTGGTACCATTCCACCTCAAATTGAAGCTCTTGCAAGTCTCACTTATCTAGACTTGTCTCACAACAATATTATTGGTACCATTCCAACTCAAATTGGACTTCTTCATAGTCTTATCTCTTTGCACTTGTCTAACAACAATCTTAGTGGTACAATTCCACCTCAAATTGAAGCTCTTGCAAGTCTCACTTATCTATACTTGTCTTGCAACAATATTATTGGTACCATTCCAACTCAAATTGGACTTCTTCATAGTCTTATCTCTTTGCACTTGTCTAACAACAATCTTAGTGGTACCATTCCACCTCAAATTGAAGCTCTTGCAAGTCTCACTTATCTAGACTTGTCTCACAACAATATTATTGGTACCATTCCAACTCAAATTGGACTTCTTCATAGTCTTATCTCTTTGAACTTGTCTAACAACAATCTTAGTGGGATCATTCCATCATCGATAGAAGATCTTCAATATCACATTCATCTGAACTTGTCTTGTAACAATTTTACTGATGGTGATACAGAATTGCTTTGGCCAGAGAAGATACATAAAGGCTCAAATTCTTTGTTGACAATCATTGTTCCTTTGATCATTTTTCTTGTGATCACATTTGTTGTGGGTTTCATCTTATTTAAATCATTAAAAAAGAACAAGAAATCCATAAGTGAGACAAGAGAAGCCAAAAATAGAGATTTGCTTTCCATATGGAACTACGATGGAAAAATTGCATTTGAAGATATAATTGATGCAACAGAGGACTTTGACATTAAATATTGTATTGGAACTGGTGCCTATGGAAGTGTTTATAGGGCACAACTTCCAAGTGGCAAAATTGTAGCATTGAAAAAGCTTCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAATGAAGTAAAGATGTTGAGTGAAATTCGACATCGCAATATTGTAAAGCTTCATGGTTTTTGTTTACATCATCAATGCATGTTCCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATGATGATGCTAAAGAGTTGGATTGGAGCAAAAGAGTGAATGCCATCAAAGGAATAGCAAATGCTTTGTTCTACATGCATCATGGTTGTGCTCCTCCAATTATCCATCGAGACATAACAAGTGGTAATGTGTTGTTAAACTCAAACATGGATGCTTTTCTATCTGACTTTGGCACAGCTAGAATCATTGATCCAGATGCATCTAACCAAACTCTTCTAGTTGGTACTTATGGTTACATTGCTCCAGAGCTTGCATACACTTTAGTTGTAACTGAAAAATGTGATGTTTATAGTTTCGGAGTGATGACATTGGAAACAATCATGGGAAGACATCCTGGAGATTTGATATTGTCTTTGTCAAAGACATGTTATGAAAGCATTTGGCTAAAAGATGTGGTAGACCCACGTATCCCACTGCCATCACGAAAAGATGCACGGGATGTAACTCTTTTGGTAGCAATAGCATTAGCATGCTTGAATCCATCTCCCCAATCTCGGCCATCAATGCAACTAGTGTCTCAAAGGCTTTCATCCTCTAACCTACCATTAGCCATTCCTTTCAATAATATCGCAATCCATCATTTAGTGAATCAAGATGTGTAA 2061 0.3707 MGVMILVLLLCFEISCSQQINMIEEEKRALLQTKWWDLSDNFSDPCDWKGMYCNEFGSVIEMSQPMITPKDPRLADLNFTAFPNLQHLGLHEMGLIGTIPPQIEALASLTYLDLSHNNILGIIPTQIGALPNLTYVDLSYNKIIGTIPPQIEALASLTYLDLSHNNIIGTIPTQIGLLHSLISLHLSNNNLSGTIPPQIEALASLTYLYLSCNNIIGTIPTQIGLLHSLISLHLSNNNLSGTIPPQIEALASLTYLDLSHNNIIGTIPTQIGLLHSLISLNLSNNNLSGIIPSSIEDLQYHIHLNLSCNNFTDGDTELLWPEKIHKGSNSLLTIIVPLIIFLVITFVVGFILFKSLKKNKKSISETREAKNRDLLSIWNYDGKIAFEDIIDATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRNIVKLHGFCLHHQCMFLIYEYMERGSLFYVLNNDDDAKELDWSKRVNAIKGIANALFYMHHGCAPPIIHRDITSGNVLLNSNMDAFLSDFGTARIIDPDASNQTLLVGTYGYIAPELAYTLVVTEKCDVYSFGVMTLETIMGRHPGDLILSLSKTCYESIWLKDVVDPRIPLPSRKDARDVTLLVAIALACLNPSPQSRPSMQLVSQRLSSSNLPLAIPFNNIAIHHLVNQDV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00074 686 Pfam Leucine Rich Repeat 276 297 IPR001611 GO:0005515
Pral3381g00074 686 FunFam MDIS1-interacting receptor like kinase 2 475 667 - -
Pral3381g00074 686 Gene3D Phosphorylase Kinase; domain 1 356 474 - -
Pral3381g00074 686 Gene3D Ribonuclease Inhibitor 21 175 IPR032675 -
Pral3381g00074 686 ProSiteProfiles Leucine-rich repeat profile. 252 274 IPR001611 GO:0005515
Pral3381g00074 686 SMART LRR_typ_2 226 249 IPR003591 -
Pral3381g00074 686 SMART LRR_typ_2 250 273 IPR003591 -
Pral3381g00074 686 SMART LRR_typ_2 130 153 IPR003591 -
Pral3381g00074 686 SMART LRR_typ_2 178 202 IPR003591 -
Pral3381g00074 686 SMART LRR_typ_2 274 297 IPR003591 -
Pral3381g00074 686 SMART LRR_typ_2 106 129 IPR003591 -
Pral3381g00074 686 SMART LRR_typ_2 154 177 IPR003591 -
Pral3381g00074 686 FunFam Leucine-rich repeat receptor protein kinase MSP1 358 474 - -
Pral3381g00074 686 PRINTS Leucine-rich repeat signature 109 122 - -
Pral3381g00074 686 PRINTS Leucine-rich repeat signature 154 167 - -
Pral3381g00074 686 ProSiteProfiles Protein kinase domain profile. 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00074 686 SUPERFAMILY Protein kinase-like (PK-like) 382 662 IPR011009 -
Pral3381g00074 686 Gene3D Ribonuclease Inhibitor 178 337 IPR032675 -
Pral3381g00074 686 ProSitePatterns Tyrosine protein kinases specific active-site signature. 520 532 IPR008266 GO:0004672|GO:0006468
Pral3381g00074 686 Pfam Protein kinase domain 400 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00074 686 PANTHER LEUCINE RICH REPEAT KINASE 2 83 666 - -
Pral3381g00074 686 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Pral3381g00074 686 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Pral3381g00074 686 FunFam Leucine-rich receptor-like protein kinase family protein 172 266 - -
Pral3381g00074 686 FunFam Nuclear pore complex protein NUP107 18 171 - -
Pral3381g00074 686 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Pral3381g00074 686 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Pral3381g00074 686 SUPERFAMILY L domain-like 32 315 - -
Pral3381g00074 686 Gene3D Transferase(Phosphotransferase) domain 1 475 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00074 Pral-Chr3381 729925 740855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00074 78 568 Receptor kinase-like Gene Family AT4G08850 39.893 3.54e-116 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3381g00074 Pkinase 2.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00074 - - pcin:129305349 702.59