Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00073 ATGGGTGTGATGATATTGGTATTGTTACTACGCTTTGAGATATCTTGCTCCCAGCAGATTAATATGATAGAAGAGGAGAAACGAGCTCTGCTTCAGACCAAATGGTGGGGTTTTGGTGACAACTTCTCAGGCATATATTGCAATGAATTTGGAAGCGTTATCGATATTAGTCAGCCAATGACCACTCCAAAGGACGAAATTCAGCTAGCAGATCTAAACTTCACTGCATTTCCCAACCTACAACATTTGGATCTTCATCAAATGGGTTTGCTAGGTACTGTTCCTACTCAGATAGCAAGTCCTTATAATCTCAGGCACTTGAACTTGTTTAATAATAATTTTACTGGTACCTTTCAAGCTCAAATTGGACTTCTTTATAATCTTATCTGTTTGAACTTGTCTAACAACAATCTTAATGGTGCCATTCCAACTCATATTGGAGCTCTTCCGAATATCATTTATCTAGACTTGTCTCATAATAATATTATTGGTGCCATTCCAACTGAAATTGGACTTCTTGGTGGTCTTGTTTATTTGGACTTGTCTAACAACAATCTTAGTGGTGCCATTCCAACTGAAATTGGACTTCTTGGTAGTCTTGTTTATTTGGACTTGTCTAACAACAATCTTAGTGGGATCATTCCATCATCGATAAAAGATCTTCAATATCTCCCTTATCTGAACTTGTCTTGTAACAATTTTAATAAATTACTTTGGCCGAAGAAGATACATAGAGGCTCAAATTCTTTGTTGAAAATCATTATTCCTTTGACAACTTTTCTTGTGATCACATGTGTTGTGGGTTTCGTCTTATTTAAATCATTCAAGAACAAGAAATCTATAAGTGAGACAAGAGAAGCCAAAAATGGAGATTTGTTTTCCATATGGAACTATGATGGAAAAATTGCATATAAAGATATAATTGATGCAACAGAGGACTTTGACATTAAATATTGTATTGGAACTGGTGCCTATGGAAGTGTTTATAGAGCACAACTTCCAAGTGGCAAAATTGTAGCATTGAAAAAGCTTCATAGAAGAGAATATGGAAACACTTCTTTGGCCAGGAGTTTTCACAATGAAGTAAAGATGTTGAGTGAAATTCGACATCGTAATATTGTAAAGCTTTATGGTTTTTGTTTACATCATCAGTGCATGTTCCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATGACGATGCTAAAGAGTTGGATTGGAGCAAGAGAGTGAATGCCATCAAAGGAATAGCAAATGCTTTGTTCTACATGCATCATGGTTGTGCTCCTCCAATTATCCATCGAGATATAACAAGTGGTAATGTGTTGTTAAACTCAAACATGGATGCTTTTCTATCTGACTTTGGCACAGCTAGAATCATTGATCCAGATGCATCTAACCAAACTCTTCTAGTTGGTACTTATGGTTACATTGCTCCAGAGCTTGCATACACCTTAGTTGTAACTGAAAAATGTGATGTTTATAGTTTTGGAGTGATGACATTGGAAACAATCATGGGAAGACATCCTGGAGATTTGATATTGTCTTTGTCAAAGACATGTTCTGAAAGCATTTGGCTAAAAGATGTGGTAGACCCACGTATCCCACTGCCATCACGAAAAGATGCACAAGACATAACTCTTTTAGTAGCAATAGCATTAGCATGCTTAAATCCATCTCTCCAGTCTCGGCCGTCAATGAAACTAGTGTCTCAAAGGCTTTCATCCTCCAACCTACCATTAGCCATTCCTTTCAATAATATCACAATCCATCATTTAGTGAATCAAGATGTGTAA 1815 0.3642 MGVMILVLLLRFEISCSQQINMIEEEKRALLQTKWWGFGDNFSGIYCNEFGSVIDISQPMTTPKDEIQLADLNFTAFPNLQHLDLHQMGLLGTVPTQIASPYNLRHLNLFNNNFTGTFQAQIGLLYNLICLNLSNNNLNGAIPTHIGALPNIIYLDLSHNNIIGAIPTEIGLLGGLVYLDLSNNNLSGAIPTEIGLLGSLVYLDLSNNNLSGIIPSSIKDLQYLPYLNLSCNNFNKLLWPKKIHRGSNSLLKIIIPLTTFLVITCVVGFVLFKSFKNKKSISETREAKNGDLFSIWNYDGKIAYKDIIDATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSLARSFHNEVKMLSEIRHRNIVKLYGFCLHHQCMFLIYEYMERGSLFYVLNNDDDAKELDWSKRVNAIKGIANALFYMHHGCAPPIIHRDITSGNVLLNSNMDAFLSDFGTARIIDPDASNQTLLVGTYGYIAPELAYTLVVTEKCDVYSFGVMTLETIMGRHPGDLILSLSKTCSESIWLKDVVDPRIPLPSRKDAQDITLLVAIALACLNPSLQSRPSMKLVSQRLSSSNLPLAIPFNNITIHHLVNQDV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00073 604 Pfam Leucine rich repeat 131 186 IPR001611 GO:0005515
Pral3381g00073 604 SUPERFAMILY L domain-like 74 239 - -
Pral3381g00073 604 FunFam Leucine-rich repeat receptor protein kinase MSP1 276 392 - -
Pral3381g00073 604 PRINTS Leucine-rich repeat signature 197 210 - -
Pral3381g00073 604 PRINTS Leucine-rich repeat signature 176 189 - -
Pral3381g00073 604 SMART LRR_typ_2 173 196 IPR003591 -
Pral3381g00073 604 SMART LRR_typ_2 197 220 IPR003591 -
Pral3381g00073 604 SMART LRR_typ_2 125 149 IPR003591 -
Pral3381g00073 604 ProSiteProfiles Protein kinase domain profile. 314 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00073 604 ProSiteProfiles Leucine-rich repeat profile. 199 220 IPR001611 GO:0005515
Pral3381g00073 604 Gene3D Ribonuclease Inhibitor 18 257 IPR032675 -
Pral3381g00073 604 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Pral3381g00073 604 SUPERFAMILY Protein kinase-like (PK-like) 297 580 IPR011009 -
Pral3381g00073 604 FunFam MDIS1-interacting receptor like kinase 2 393 585 - -
Pral3381g00073 604 FunFam Piriformospora indica-insensitive protein 2 142 239 - -
Pral3381g00073 604 Pfam Protein kinase domain 318 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00073 604 Gene3D Transferase(Phosphotransferase) domain 1 393 586 - -
Pral3381g00073 604 Gene3D Phosphorylase Kinase; domain 1 274 392 - -
Pral3381g00073 604 Pfam Leucine Rich Repeat 199 220 IPR001611 GO:0005515
Pral3381g00073 604 ProSitePatterns Tyrosine protein kinases specific active-site signature. 438 450 IPR008266 GO:0004672|GO:0006468
Pral3381g00073 604 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 77 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00073 Pral-Chr3381 602000 607912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00073 80 486 Receptor kinase-like Gene Family AT4G08850 41.425 5.84e-103 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3381g00073 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00073 - - pcin:129307102 671.774