Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00065 ATGGCAATCTCCAACTTCATGTGGACTCCTGTAATATTACTATTATGCCATGCCATTCGTTTCCCCCTCAGTATTGCTACCGCCATGATAGACGAGGAGAAGCATGCTTTGCTTCAGAGCAACTGGTTCAATGGCTCCAATTTTAATTCAGACGACCCTTGTGGATGGAATTGCATAACTTGCAATGATGTTGGAAGCGTTGTTTCGATACAGCTGCCATATGAACCCATTTCAATCCAGCCTCGAGCTCAGCTAGCAGATCTCAACTTCACTGCATTTCTCAATCTTGAAGGTTTGGGTGTTCAAATGGGATTGATAGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCATCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAACTCAGATAGGAGCTCTTCAAAATCTCATTTCTCTGGATTTATCTTGCAATAACCTGAGAGGTTATATCCCTTCTTCAATTTTCAATTTGAGAGATTTACAACACTTTATTGTTTCTCAAAATCAATTAAGTGGTAGCATACCAGAAAAATTAGCAAATTTCAATAATCGGTCTTATATAGACGTCTCCCAAAATAATCTGAGTGGAAACATACCATACTTAAATGATCATTTTCATTTTAATGGTAACTTTAGTCACAACAAATTCAATGGAATACTATCATCTAGTATATGCAGTGCTCCACCATTGTGTAGCATTGATTTGAGCTACAATAGTATCTCTGGTAGCATACCTACAGAACTTTGTAGGCTACAGTACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAATCTATAGCTGTTTTCATTATGATTGTTTCAAGGGCAATAAAGAATTACTTGGTCTAGAGAAGATACATAAAGGCTCAAAGTCTTTGTTGAAAATCATTATTCCTTTGACAAGTTTTCTTGTCATCACATTTGTTCTGGGTTTCATCTTATTCGAATCATTCAGAAAGAACAAGAAATCCATAAGGGGTACAAGAGAAGCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGGAAAATTGCGTATGAAGACGTCATTGAAGCAACAGAGGACTTTGATATCAAATATTGCATTGGAACAGGTGCCTATGGAAGTGTTTATAGAGCACAACTTCCAAGTGGAAAAATCGTGGCATTGAAAAAACTTCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAACGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATCGTAAAGCTTCATGGTTTTTGCTTGCATAGTCAATGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATAATGAAGCAAAAGAGTTGAATTGGAGTAAGAGAGTGAACGCCATTAAAGGAATAAGAAATGCTTTGTTGTATATGCATCATGACTGTGCTCCTCCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAACATGGAGGCTTTTCTATCGGACTTTGGTACAGCTAGAATCATTGATCCAAATACATCTAATCAAACTCTTTTGGTTGGTACTTATGGTTATGTTGCCCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGATATTAGAAACAATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACTTGTACAGGAAGCATTTTGCTAAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCATGGAAAGATGCGAAAGACGTGACTTTTTTGGTCGCAATAGCATTATCATGCTTGAACCCGTCTCCCAATTCTCGACCATCAATACAAAAAGTGTCTCAAAGGCTTTTATCTTCCAACCTTCCATTAGCCTTTCCTTTCAACAATATCTCAATCCAAGATTTAGTGAATGAAGATATGCCAATAATACAGTAA 2280 0.3675 MAISNFMWTPVILLLCHAIRFPLSIATAMIDEEKHALLQSNWFNGSNFNSDDPCGWNCITCNDVGSVVSIQLPYEPISIQPRAQLADLNFTAFLNLEGLGVQMGLIGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLIYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGIIPTQIGALQNLISLDLSCNNLRGYIPSSIFNLRDLQHFIVSQNQLSGSIPEKLANFNNRSYIDVSQNNLSGNIPYLNDHFHFNGNFSHNKFNGILSSSICSAPPLCSIDLSYNSISGSIPTELCRLQYINLSYNLLSGYVPSEIYSCFHYDCFKGNKELLGLEKIHKGSKSLLKIIIPLTSFLVITFVLGFILFESFRKNKKSIRGTREAKNGDLFSIWNYDGKIAYEDVIEATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRNIVKLHGFCLHSQCMFLIYEYMERGSLFYVLNNDNEAKELNWSKRVNAIKGIRNALLYMHHDCAPPIIHRDITSNNILLNSNMEAFLSDFGTARIIDPNTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVILETIMGRHPGDLILSLSKTCTGSILLKDILDSRLPLPSWKDAKDVTFLVAIALSCLNPSPNSRPSIQKVSQRLLSSNLPLAFPFNNISIQDLVNEDMPIIQ 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00065 759 SMART LRR_sd22_2 212 238 - -
Pral3381g00065 759 SMART LRR_sd22_2 164 185 - -
Pral3381g00065 759 SMART LRR_sd22_2 188 209 - -
Pral3381g00065 759 SMART LRR_sd22_2 140 161 - -
Pral3381g00065 759 SMART LRR_sd22_2 260 286 - -
Pral3381g00065 759 SMART LRR_sd22_2 116 137 - -
Pral3381g00065 759 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Pral3381g00065 759 Gene3D Ribonuclease Inhibitor 27 206 IPR032675 -
Pral3381g00065 759 Gene3D Ribonuclease Inhibitor 207 311 IPR032675 -
Pral3381g00065 759 PANTHER LEUCINE RICH REPEAT KINASE 2 210 735 - -
Pral3381g00065 759 SUPERFAMILY Protein kinase-like (PK-like) 448 731 IPR011009 -
Pral3381g00065 759 ProSiteProfiles Leucine-rich repeat profile. 190 211 IPR001611 GO:0005515
Pral3381g00065 759 ProSitePatterns Tyrosine protein kinases specific active-site signature. 589 601 IPR008266 GO:0004672|GO:0006468
Pral3381g00065 759 Gene3D Ribonuclease Inhibitor 312 397 IPR032675 -
Pral3381g00065 759 FunFam MDIS1-interacting receptor like kinase 2 544 736 - -
Pral3381g00065 759 PRINTS Leucine-rich repeat signature 119 132 - -
Pral3381g00065 759 PRINTS Leucine-rich repeat signature 164 177 - -
Pral3381g00065 759 FunFam Piriformospora indica-insensitive protein 2 181 273 - -
Pral3381g00065 759 ProSiteProfiles Protein kinase domain profile. 465 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00065 759 SUPERFAMILY L domain-like 50 304 - -
Pral3381g00065 759 FunFam Leucine-rich repeat receptor protein kinase MSP1 427 543 - -
Pral3381g00065 759 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Pral3381g00065 759 Pfam Leucine rich repeat 214 273 IPR001611 GO:0005515
Pral3381g00065 759 Pfam Leucine Rich repeat 189 203 IPR001611 GO:0005515
Pral3381g00065 759 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
Pral3381g00065 759 FunFam Nuclear pore complex protein NUP107 26 179 - -
Pral3381g00065 759 SUPERFAMILY L domain-like 314 375 - -
Pral3381g00065 759 Gene3D Phosphorylase Kinase; domain 1 426 543 - -
Pral3381g00065 759 Gene3D Transferase(Phosphotransferase) domain 1 544 737 - -
Pral3381g00065 759 SMART LRR_typ_2 236 260 IPR003591 -
Pral3381g00065 759 SMART LRR_typ_2 351 375 IPR003591 -
Pral3381g00065 759 SMART LRR_typ_2 140 163 IPR003591 -
Pral3381g00065 759 SMART LRR_typ_2 188 211 IPR003591 -
Pral3381g00065 759 SMART LRR_typ_2 212 235 IPR003591 -
Pral3381g00065 759 SMART LRR_typ_2 164 187 IPR003591 -
Pral3381g00065 759 SMART LRR_typ_2 116 139 IPR003591 -
Pral3381g00065 759 Pfam Protein kinase domain 469 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00065 759 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00065 Pral-Chr3381 384330 400188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00065 105 637 Receptor kinase-like Gene Family AT4G08850 36.086 3.22e-114 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3381g00065 Pkinase 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00065 - - pcin:129305349 848.58