Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00062 ATGGCAATCTCCAACTTCATGTGGACTCCTGTAATATTACTATTATGCCATGCCATTCGTTTCCCCCTCAGTATTGCTACCGCCATGATAGACGAGGAGAAGCATGCTTTGCTTCAGAGCAACTGGTTCAATGGCTCCAATTTTAATTCAGACGACCCTTGTGGATGGAATTGCATAACTTGCAATGATGTTGGAAGCGTTGTTTCGATACAGCTGCCATATGAACCCATTTCAATCCAGCCTCGAGCTCAGCTAGCAGATCTCAACTTCACTGCATTTCTCAATCTTGAAGGTTTGGGTGTTCAAATGGGATTGATAGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCATCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATGATTTCAACTCAAATTGGAGCTCTTCATAATCTCACCCATTTGGACTTGTCACATAACAAGCTTACTGGGATCATTCCATCCCAAATAGGAGCTCTTCGAGATCTCACTAATTTAGACTTGTCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGTTCTTCGAGATCTCACTAATTTAGACTTGTCTTTTAATAATCTTACTGGTATCATTCCATCTCAAATTGAAGGCCTTCAATATCTCCAAGATCTAAATTTGTCACATAACAATATTATTTCAAAAGAGAAGGACATACTGCTGGAGAGCAAATGGTGGAATATCAACGATAGTGGGTCTAACTATCATTGTGACTGGCATGGCATATCTTGCAATCTCTTTGAAAATGTGATTTCAATTGACCAGCCAAGAATCCATTCAAAGCAACCTCAGCTAGCAGATCTCAACTTCACTATATTAGAAAAACTAGAATATTTAAATCTTTCTAGAATGGGGATAACAGGTATTATTCCAACTCAGATAGGAGCTCTTCAAAATCTCATTTCTCTGGATTTATCTTGCAATAACCTGAGAGGTTATATCCCTTCTTCAATTTTCAATTTGAGAGATTTACAACACTTTATTGTTTCTCAAAATCAATTAAGTGGTAGCATACCAGAAAAATTAGCAAATTTCAATAATCGGTCTTATATAGACGTCTCCCAAAATAATCTGAGTGGAAACATACCATACTTAAATGATCATTTTCATTTTAATGGTAACTTTAGTCACAACAAATTCAATGGAATACTATCATCTAGTATATGCAGTGCTCCACCATTGTGTAGCATTGATTTGAGCTACAATAGTATCTCTGGTAGCATACCTACAGAACTTTGTAGGCTACAGTACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAATCTATAGCTGTTTTCATTATGATTGTTTCAAGGGCAATAAAGAATTACTTGGTCTAGAGAAGATACATAAAGGCTCAAAGTCTTTGTTGAAAATCATTATTCCTTTGACAAGTTTTCTTGTCATCACATTTGTTCTGGGTTTCATCTTATTCGAATCATTCAGAAAGAACAAGAAATCCATAAGGGGTACAAGAGAAGCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGGAAAATTGCGTATGAAGACGTCATTGAAGCAACAGAGGACTTTGATATCAAATATTGCATTGGAACAGGTGCCTATGGAAGTGTTTATAGAGCACAACTTCCAAGTGGAAAAATCGTGGCATTGAAAAAACTTCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAACGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATCGTAAAGCTTCATGGTTTTTGCTTGCATAGTCAATGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATAATGAAGCAAAAGAGTTGAATTGGAGTAAGAGAGTGAACGCCATTAAAGGAATAAGAAATGCTTTGTTGTATATGCATCATGACTGTGCTCCTCCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAACATGGAGGCTTTTCTATCGGACTTTGGTACAGCTAGAATCATTGATCCAAATACATCTAATCAAACTCTTTTGGTTGGTACTTATGGTTATGTTGCCCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGATATTAGAAACAATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACTTGTACAGGAAGCATTTTGCTAAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCATGGAAAGATGCGAAAGACGTGACTTTTTTGGTCGCAATAGCATTATCATGCTTGAACCCGTCTCCCAATTCTCGACCATCAATACAAAAAGTGTCTCAAAGGCTTTTATCTTCCAACCTTCCATTAGCCTTTCCTTTCAACAATATCTCAATCCAAGATTTAGTGAATGAAGATATGCCAATAATACAGTAA 2718 0.3653 MAISNFMWTPVILLLCHAIRFPLSIATAMIDEEKHALLQSNWFNGSNFNSDDPCGWNCITCNDVGSVVSIQLPYEPISIQPRAQLADLNFTAFLNLEGLGVQMGLIGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLIYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGMISTQIGALHNLTHLDLSHNKLTGIIPSQIGALRDLTNLDLSFNNLTGIIPSQIGVLRDLTNLDLSFNNLTGIIPSQIEGLQYLQDLNLSHNNIISKEKDILLESKWWNINDSGSNYHCDWHGISCNLFENVISIDQPRIHSKQPQLADLNFTILEKLEYLNLSRMGITGIIPTQIGALQNLISLDLSCNNLRGYIPSSIFNLRDLQHFIVSQNQLSGSIPEKLANFNNRSYIDVSQNNLSGNIPYLNDHFHFNGNFSHNKFNGILSSSICSAPPLCSIDLSYNSISGSIPTELCRLQYINLSYNLLSGYVPSEIYSCFHYDCFKGNKELLGLEKIHKGSKSLLKIIIPLTSFLVITFVLGFILFESFRKNKKSIRGTREAKNGDLFSIWNYDGKIAYEDVIEATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRNIVKLHGFCLHSQCMFLIYEYMERGSLFYVLNNDNEAKELNWSKRVNAIKGIRNALLYMHHDCAPPIIHRDITSNNILLNSNMEAFLSDFGTARIIDPNTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVILETIMGRHPGDLILSLSKTCTGSILLKDILDSRLPLPSWKDAKDVTFLVAIALSCLNPSPNSRPSIQKVSQRLLSSNLPLAFPFNNISIQDLVNEDMPIIQ 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00062 905 Gene3D Ribonuclease Inhibitor 459 541 IPR032675 -
Pral3381g00062 905 ProSiteProfiles Protein kinase domain profile. 611 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00062 905 SUPERFAMILY Protein kinase-like (PK-like) 594 877 IPR011009 -
Pral3381g00062 905 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Pral3381g00062 905 FunFam Nuclear pore complex protein NUP107 304 449 - -
Pral3381g00062 905 SUPERFAMILY L domain-like 319 519 - -
Pral3381g00062 905 PRINTS Leucine-rich repeat signature 119 132 - -
Pral3381g00062 905 PRINTS Leucine-rich repeat signature 212 225 - -
Pral3381g00062 905 Pfam Protein kinase domain 615 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00062 905 FunFam MDIS1-interacting receptor like kinase 2 690 882 - -
Pral3381g00062 905 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Pral3381g00062 905 Pfam Leucine rich repeat 360 419 IPR001611 GO:0005515
Pral3381g00062 905 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Pral3381g00062 905 Gene3D Ribonuclease Inhibitor 302 458 IPR032675 -
Pral3381g00062 905 ProSiteProfiles Leucine-rich repeat profile. 214 235 IPR001611 GO:0005515
Pral3381g00062 905 SMART LRR_sd22_2 164 185 - -
Pral3381g00062 905 SMART LRR_sd22_2 188 207 - -
Pral3381g00062 905 SMART LRR_sd22_2 260 286 - -
Pral3381g00062 905 SMART LRR_sd22_2 140 161 - -
Pral3381g00062 905 SMART LRR_sd22_2 212 244 - -
Pral3381g00062 905 SMART LRR_sd22_2 406 432 - -
Pral3381g00062 905 SMART LRR_sd22_2 116 137 - -
Pral3381g00062 905 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Pral3381g00062 905 SUPERFAMILY L domain-like 50 299 - -
Pral3381g00062 905 Gene3D Phosphorylase Kinase; domain 1 572 689 - -
Pral3381g00062 905 FunFam Leucine-rich repeat receptor-like protein kinase TDR 88 303 - -
Pral3381g00062 905 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
Pral3381g00062 905 Gene3D Transferase(Phosphotransferase) domain 1 690 883 - -
Pral3381g00062 905 PANTHER LEUCINE RICH REPEAT KINASE 2 351 881 - -
Pral3381g00062 905 FunFam Leucine-rich repeat receptor protein kinase MSP1 573 689 - -
Pral3381g00062 905 Gene3D Ribonuclease Inhibitor 25 301 IPR032675 -
Pral3381g00062 905 ProSitePatterns Tyrosine protein kinases specific active-site signature. 735 747 IPR008266 GO:0004672|GO:0006468
Pral3381g00062 905 SMART LRR_typ_2 212 235 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 382 406 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 260 283 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 497 521 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 140 163 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 164 187 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 188 211 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 116 139 IPR003591 -
Pral3381g00062 905 SMART LRR_typ_2 236 259 IPR003591 -
Pral3381g00062 905 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00062 Pral-Chr3381 384330 400188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00062 105 783 Receptor kinase-like Gene Family AT4G08850 38.798 7.27e-138 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3381g00062 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00062 - - pcin:129297054 967.607