Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00061 ATGGCAATCTCCAACTTCATGTGGACTCCTGTAATATTACTATTATGCCATGCCATTCGTTTCCCCCTCAGTATTGCTACCGCCATGATAGACGAGGAGAAGCATGCTTTGCTTCAGAGCAACTGGTTCAATGGCTCCAATTTTAATTCAGACGACCCTTGTGGATGGAATTGCATAACTTGCAATGATGTTGGAAGCGTTGTTTCGATACAGCTGCCATATGAACCCATTTCAATCCAGCCTCGAGCTCAGCTAGCAGATCTCAACTTCACTGCATTTCTCAATCTTGAAGGTTTGGGTGTTCAAATGGGATTGATAGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCATCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATGATTTCAACTCAAATTGGAGCTCTTCATAATCTCACCCATTTGGACTTGTCACATAACAAGCTTACTGGGATCATTCCATCCCAAATAGGAGCTCTTCGAGATCTCACTAATTTAGACTTGTCTTTTAACAATCTTACTGGTATCATTCCATCTCAAATTGAAGGCCTTCAATATCTCCAAGATCTAAATTTGTCACATAACAATATTATTTCAAAAGAGAAGGACATACTGCTGGAGAGCAAATGGTGGAATATCAACGATAGTGGGTCTAACTATCATTGTGACTGGCATGGCATATCTTGCAATCTCTTTGAAAATGTGATTTCAATTGACCAGCCAAGAATCCATTCAAAGCAACCTCAGCTAGCAGATCTCAACTTCACTATATTAGAAAAACTAGAATATTTAAATCTTTCTAGAATGGGGATAACAGGTATTATTCCAACTCAGATAGGAGCTCTTCAAAATCTCATTTCTCTGGATTTATCTTGCAATAACCTGAGAGGTTATATCCCTTCTTCAATTTTCAATTTGAGAGATTTACAACACTTTATTGTTTCTCAAAATCAATTAAGTGGTAGCATACCAGAAAAATTAGCAAATTTCAATAATCGGTCTTATATAGACGTCTCCCAAAATAATCTGAGTGGAAACATACCATACTTAAATGATCATTTTCATTTTAATGGTAACTTTAGTCACAACAAATTCAATGGAATACTATCATCTAGTATATGCAGTGCTCCACCATTGTGTAGCATTGATTTGAGCTACAATAGTATCTCTGGTAGCATACCTACAGAACTTTGTAGGCTACAGTACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAATCTATAGCTGTTTTCATTATGATTGTTTCAAGGGCAATAAAGAATTACTTGGTCTAGAGAAGATACATAAAGGCTCAAAGTCTTTGTTGAAAATCATTATTCCTTTGACAAGTTTTCTTGTCATCACATTTGTTCTGGGTTTCATCTTATTCGAATCATTCAGAAAGAACAAGAAATCCATAAGGGGTACAAGAGAAGCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGGAAAATTGCGTATGAAGACGTCATTGAAGCAACAGAGGACTTTGATATCAAATATTGCATTGGAACAGGTGCCTATGGAAGTGTTTATAGAGCACAACTTCCAAGTGGAAAAATCGTGGCATTGAAAAAACTTCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAACGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATCGTAAAGCTTCATGGTTTTTGCTTGCATAGTCAATGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATAATGAAGCAAAAGAGTTGAATTGGAGTAAGAGAGTGAACGCCATTAAAGGAATAAGAAATGCTTTGTTGTATATGCATCATGACTGTGCTCCTCCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAACATGGAGGCTTTTCTATCGGACTTTGGTACAGCTAGAATCATTGATCCAAATACATCTAATCAAACTCTTTTGGTTGGTACTTATGGTTATGTTGCCCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGATATTAGAAACAATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACTTGTACAGGAAGCATTTTGCTAAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCATGGAAAGATGCGAAAGACGTGACTTTTTTGGTCGCAATAGCATTATCATGCTTGAACCCGTCTCCCAATTCTCGACCATCAATACAAAAAGTGTCTCAAAGGCTTTTATCTTCCAACCTTCCATTAGCCTTTCCTTTCAACAATATCTCAATCCAAGATTTAGTGAATGAAGATATGCCAATAATACAGTAA 2646 0.3662 MAISNFMWTPVILLLCHAIRFPLSIATAMIDEEKHALLQSNWFNGSNFNSDDPCGWNCITCNDVGSVVSIQLPYEPISIQPRAQLADLNFTAFLNLEGLGVQMGLIGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLIYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGMISTQIGALHNLTHLDLSHNKLTGIIPSQIGALRDLTNLDLSFNNLTGIIPSQIEGLQYLQDLNLSHNNIISKEKDILLESKWWNINDSGSNYHCDWHGISCNLFENVISIDQPRIHSKQPQLADLNFTILEKLEYLNLSRMGITGIIPTQIGALQNLISLDLSCNNLRGYIPSSIFNLRDLQHFIVSQNQLSGSIPEKLANFNNRSYIDVSQNNLSGNIPYLNDHFHFNGNFSHNKFNGILSSSICSAPPLCSIDLSYNSISGSIPTELCRLQYINLSYNLLSGYVPSEIYSCFHYDCFKGNKELLGLEKIHKGSKSLLKIIIPLTSFLVITFVLGFILFESFRKNKKSIRGTREAKNGDLFSIWNYDGKIAYEDVIEATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRNIVKLHGFCLHSQCMFLIYEYMERGSLFYVLNNDNEAKELNWSKRVNAIKGIRNALLYMHHDCAPPIIHRDITSNNILLNSNMEAFLSDFGTARIIDPNTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVILETIMGRHPGDLILSLSKTCTGSILLKDILDSRLPLPSWKDAKDVTFLVAIALSCLNPSPNSRPSIQKVSQRLLSSNLPLAFPFNNISIQDLVNEDMPIIQ 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00061 881 ProSitePatterns Protein kinases ATP-binding region signature. 593 615 IPR017441 GO:0005524
Pral3381g00061 881 SUPERFAMILY L domain-like 295 495 - -
Pral3381g00061 881 SUPERFAMILY L domain-like 50 275 - -
Pral3381g00061 881 SMART LRR_typ_2 212 235 IPR003591 -
Pral3381g00061 881 SMART LRR_typ_2 358 382 IPR003591 -
Pral3381g00061 881 SMART LRR_typ_2 473 497 IPR003591 -
Pral3381g00061 881 SMART LRR_typ_2 236 259 IPR003591 -
Pral3381g00061 881 SMART LRR_typ_2 140 163 IPR003591 -
Pral3381g00061 881 SMART LRR_typ_2 164 187 IPR003591 -
Pral3381g00061 881 SMART LRR_typ_2 188 211 IPR003591 -
Pral3381g00061 881 SMART LRR_typ_2 116 139 IPR003591 -
Pral3381g00061 881 Gene3D Ribonuclease Inhibitor 181 278 IPR032675 -
Pral3381g00061 881 Gene3D Ribonuclease Inhibitor 435 517 IPR032675 -
Pral3381g00061 881 Gene3D Transferase(Phosphotransferase) domain 1 666 859 - -
Pral3381g00061 881 PRINTS Leucine-rich repeat signature 212 225 - -
Pral3381g00061 881 PRINTS Leucine-rich repeat signature 119 132 - -
Pral3381g00061 881 FunFam Nuclear pore complex protein NUP107 277 425 - -
Pral3381g00061 881 Pfam Leucine Rich repeats (2 copies) 190 227 IPR025875 -
Pral3381g00061 881 ProSiteProfiles Leucine-rich repeat profile. 262 283 IPR001611 GO:0005515
Pral3381g00061 881 SUPERFAMILY Protein kinase-like (PK-like) 570 853 IPR011009 -
Pral3381g00061 881 FunFam Leucine-rich repeat receptor protein kinase EMS1 183 276 - -
Pral3381g00061 881 Gene3D Phosphorylase Kinase; domain 1 548 665 - -
Pral3381g00061 881 ProSitePatterns Tyrosine protein kinases specific active-site signature. 711 723 IPR008266 GO:0004672|GO:0006468
Pral3381g00061 881 SMART LRR_sd22_2 212 233 - -
Pral3381g00061 881 SMART LRR_sd22_2 164 185 - -
Pral3381g00061 881 SMART LRR_sd22_2 382 408 - -
Pral3381g00061 881 SMART LRR_sd22_2 188 207 - -
Pral3381g00061 881 SMART LRR_sd22_2 140 161 - -
Pral3381g00061 881 SMART LRR_sd22_2 236 262 - -
Pral3381g00061 881 SMART LRR_sd22_2 116 137 - -
Pral3381g00061 881 FunFam MDIS1-interacting receptor like kinase 2 666 858 - -
Pral3381g00061 881 ProSiteProfiles Leucine-rich repeat profile. 214 235 IPR001611 GO:0005515
Pral3381g00061 881 FunFam Nuclear pore complex protein NUP107 26 182 - -
Pral3381g00061 881 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
Pral3381g00061 881 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Pral3381g00061 881 Gene3D Ribonuclease Inhibitor 279 434 IPR032675 -
Pral3381g00061 881 ProSiteProfiles Protein kinase domain profile. 587 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00061 881 Pfam Protein kinase domain 591 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00061 881 PANTHER LEUCINE RICH REPEAT KINASE 2 327 857 - -
Pral3381g00061 881 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Pral3381g00061 881 Pfam Leucine rich repeat 238 276 IPR001611 GO:0005515
Pral3381g00061 881 Pfam Leucine rich repeat 336 395 IPR001611 GO:0005515
Pral3381g00061 881 FunFam Leucine-rich repeat receptor protein kinase MSP1 549 665 - -
Pral3381g00061 881 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00061 Pral-Chr3381 384330 400188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00061 105 759 Receptor kinase-like Gene Family AT4G08850 38.418 4.11e-132 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3381g00061 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00061 - - pcin:129297054 981.089