Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00059 ATGGCAATCTCCAACTTCATGTGGACTCCTGTAATATTACTATTATGCCATGCCATTCGTTTCCCCCTCAGTATTGCTACCGCCATGATAGACGAGGAGAAGCATGCTTTGCTTCAGAGCAACTGGTTCAATGGCTCCAATTTTAATTCAGACGACCCTTGTGGATGGAATTGCATAACTTGCAATGATGTTGGAAGCGTTGTTTCGATACAGCTGCCATATGAACCCATTTCAATCCAGCCTCGAGCTCAGCTAGCAGATCTCAACTTCACTGCATTTCTCAATCTTGAAGGTTTGGGTGTTCAAATGGGATTGATAGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCATCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATTATTCCAATTCAAATTGGAGCTCTTCATAATCTCACCTATCTGGACTTGTCGTATAACAAGCTCACTGGTATGATTTCAACTCAAATTGGAGCTCTTCATAATCTCACCCATTTGGACTTGTCACATAACAAGCTTACTGGGATCATTCCATCCCAAATAGGAGCTCTTCGAGATCTCACTAATTTAGACTTGTCTTTTAACAATCTTACTGGGATCATTCCATCCCAAATAGGAGCTCTTCGAGATCTCACTAATTTAGACTTGTCTTTTAACAATCTTACTGGGATTATTCCATCCCAAATAGGAGTTCTTCGAGATCTCACTAATTTAGACTTGTCTTTTAATAATCTTACTGGTATCATTCCATCTCAAATTGAAGGCCTTCAATATCTCCAAGATCTAAATTTGTCACATAACAATATTATTTCAAAAGAGAAGGACATACTGCTGGAGAGCAAATGGTGGAATATCAACGATAGTGGGTCTAACTATCATTGTGACTGGCATGGCATATCTTGCAATCTCTTTGAAAATGTGATTTCAATTGACCAGCCAAGAATCCATTCAAAGCAACCTCAGCTAGCAGATCTCAACTTCACTATATTAGAAAAACTAGAATATTTAAATCTTTCTAGAATGGGGATAACAGGTATTATTCCAACTCAGATAGGAGCTCTTCAAAATCTCATTTCTCTGGATTTATCTTGCAATAACCTGAGAGGTTATATCCCTTCTTCAATTTTCAATTTGAGAGATTTACAACACTTTATTGTTTCTCAAAATCAATTAAGTGGTAGCATACCAGAAAAATTAGCAAATTTCAATAATCGGTCTTATATAGACGTCTCCCAAAATAATCTGAGTGGAAACATACCATACTTAAATGATCATTTTCATTTTAATGGTAACTTTAGTCACAACAAATTCAATGGAATACTATCATCTAGTATATGCAGTGCTCCACCATTGTGTAGCATTGATTTGAGCTACAATAGTATCTCTGGTAGCATACCTACAGAACTTTGTAGGCTACAGTACATCAACTTGTCATACAATCTTCTTAGCGGCTATGTTCCAAGTGAAATCTATAGCTGTTTTCATTATGATTGTTTCAAGGGCAATAAAGAATTACTTGGTCTAGAGAAGATACATAAAGGCTCAAAGTCTTTGTTGAAAATCATTATTCCTTTGACAAGTTTTCTTGTCATCACATTTGTTCTGGGTTTCATCTTATTCGAATCATTCAGAAAGAACAAGAAATCCATAAGGGGTACAAGAGAAGCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGGAAAATTGCGTATGAAGACGTCATTGAAGCAACAGAGGACTTTGATATCAAATATTGCATTGGAACAGGTGCCTATGGAAGTGTTTATAGAGCACAACTTCCAAGTGGAAAAATCGTGGCATTGAAAAAACTTCATAGAAGAGAATATGGAAACACATCTTTTGCCAAGAGTTTTCACAACGAAGTGAAGATGTTGAGTGAAATTCGACATCGCAATATCGTAAAGCTTCATGGTTTTTGCTTGCATAGTCAATGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTTTTTTATGTGTTGAATAATGATAATGAAGCAAAAGAGTTGAATTGGAGTAAGAGAGTGAACGCCATTAAAGGAATAAGAAATGCTTTGTTGTATATGCATCATGACTGTGCTCCTCCAATTATCCACCGAGACATAACAAGCAATAATATATTGTTGAACTCAAACATGGAGGCTTTTCTATCGGACTTTGGTACAGCTAGAATCATTGATCCAAATACATCTAATCAAACTCTTTTGGTTGGTACTTATGGTTATGTTGCCCCAGAGCTTGCATACACCTTAGTTGTTACTGAAAAATGCGATGTTTATAGTTTCGGGGTGGTGATATTAGAAACAATTATGGGAAGACATCCTGGAGATTTGATATTATCTTTGTCAAAGACTTGTACAGGAAGCATTTTGCTAAAGGATATTTTAGACTCACGTCTCCCTTTGCCATCATGGAAAGATGCGAAAGACGTGACTTTTTTGGTCGCAATAGCATTATCATGCTTGAACCCGTCTCCCAATTCTCGACCATCAATACAAAAAGTGTCTCAAAGGCTTTTATCTTCCAACCTTCCATTAGCCTTTCCTTTCAACAATATCTCAATCCAAGATTTAGTGAATGAAGATATGCCAATAATACAGTAA 2790 0.3656 MAISNFMWTPVILLLCHAIRFPLSIATAMIDEEKHALLQSNWFNGSNFNSDDPCGWNCITCNDVGSVVSIQLPYEPISIQPRAQLADLNFTAFLNLEGLGVQMGLIGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLIYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGIIPIQIGALHNLTYLDLSYNKLTGMISTQIGALHNLTHLDLSHNKLTGIIPSQIGALRDLTNLDLSFNNLTGIIPSQIGALRDLTNLDLSFNNLTGIIPSQIGVLRDLTNLDLSFNNLTGIIPSQIEGLQYLQDLNLSHNNIISKEKDILLESKWWNINDSGSNYHCDWHGISCNLFENVISIDQPRIHSKQPQLADLNFTILEKLEYLNLSRMGITGIIPTQIGALQNLISLDLSCNNLRGYIPSSIFNLRDLQHFIVSQNQLSGSIPEKLANFNNRSYIDVSQNNLSGNIPYLNDHFHFNGNFSHNKFNGILSSSICSAPPLCSIDLSYNSISGSIPTELCRLQYINLSYNLLSGYVPSEIYSCFHYDCFKGNKELLGLEKIHKGSKSLLKIIIPLTSFLVITFVLGFILFESFRKNKKSIRGTREAKNGDLFSIWNYDGKIAYEDVIEATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRNIVKLHGFCLHSQCMFLIYEYMERGSLFYVLNNDNEAKELNWSKRVNAIKGIRNALLYMHHDCAPPIIHRDITSNNILLNSNMEAFLSDFGTARIIDPNTSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVILETIMGRHPGDLILSLSKTCTGSILLKDILDSRLPLPSWKDAKDVTFLVAIALSCLNPSPNSRPSIQKVSQRLLSSNLPLAFPFNNISIQDLVNEDMPIIQ 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00059 929 ProSiteProfiles Protein kinase domain profile. 635 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00059 929 PRINTS Leucine-rich repeat signature 119 132 - -
Pral3381g00059 929 PRINTS Leucine-rich repeat signature 212 225 - -
Pral3381g00059 929 SMART LRR_sd22_2 212 233 - -
Pral3381g00059 929 SMART LRR_sd22_2 236 268 - -
Pral3381g00059 929 SMART LRR_sd22_2 164 185 - -
Pral3381g00059 929 SMART LRR_sd22_2 188 207 - -
Pral3381g00059 929 SMART LRR_sd22_2 284 310 - -
Pral3381g00059 929 SMART LRR_sd22_2 140 161 - -
Pral3381g00059 929 SMART LRR_sd22_2 430 456 - -
Pral3381g00059 929 SMART LRR_sd22_2 116 137 - -
Pral3381g00059 929 FunFam Leucine-rich repeat receptor protein kinase MSP1 597 713 - -
Pral3381g00059 929 Gene3D Ribonuclease Inhibitor 327 482 IPR032675 -
Pral3381g00059 929 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Pral3381g00059 929 Gene3D Phosphorylase Kinase; domain 1 596 713 - -
Pral3381g00059 929 ProSitePatterns Tyrosine protein kinases specific active-site signature. 759 771 IPR008266 GO:0004672|GO:0006468
Pral3381g00059 929 FunFam MDIS1-interacting receptor like kinase 2 714 906 - -
Pral3381g00059 929 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Pral3381g00059 929 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Pral3381g00059 929 Pfam Leucine rich repeat 384 443 IPR001611 GO:0005515
Pral3381g00059 929 Pfam Leucine rich repeat 286 323 IPR001611 GO:0005515
Pral3381g00059 929 PANTHER LEUCINE RICH REPEAT KINASE 2 375 905 - -
Pral3381g00059 929 ProSiteProfiles Leucine-rich repeat profile. 214 235 IPR001611 GO:0005515
Pral3381g00059 929 Pfam Protein kinase domain 639 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3381g00059 929 ProSiteProfiles Leucine-rich repeat profile. 310 331 IPR001611 GO:0005515
Pral3381g00059 929 SUPERFAMILY Protein kinase-like (PK-like) 618 901 IPR011009 -
Pral3381g00059 929 SUPERFAMILY L domain-like 51 348 - -
Pral3381g00059 929 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 83 327 - -
Pral3381g00059 929 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
Pral3381g00059 929 Gene3D Ribonuclease Inhibitor 483 565 IPR032675 -
Pral3381g00059 929 SUPERFAMILY L domain-like 342 544 - -
Pral3381g00059 929 Gene3D Ribonuclease Inhibitor 185 326 IPR032675 -
Pral3381g00059 929 SMART LRR_typ_2 284 307 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 212 235 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 236 259 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 406 430 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 140 163 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 521 545 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 164 187 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 260 283 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 188 211 IPR003591 -
Pral3381g00059 929 SMART LRR_typ_2 116 139 IPR003591 -
Pral3381g00059 929 Gene3D Transferase(Phosphotransferase) domain 1 714 907 - -
Pral3381g00059 929 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Pral3381g00059 929 FunFam Nuclear pore complex protein NUP107 328 473 - -
Pral3381g00059 929 ProSiteProfiles Leucine-rich repeat profile. 166 187 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00059 Pral-Chr3381 384330 400188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00059 105 807 Receptor kinase-like Gene Family AT4G08850 38.889 2.63e-141 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3381g00059 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00059 - - pcin:129297054 979.163