Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00030 ATGAGCCCAACTAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCGTGCACAGACATTGATTTCTGGAGCAGACTATCTTTTACAAGTTCAGCAAGATAGACCTGGAGGCAGTGATGCTAGTACTTCTTTCATTGATGGCCGAAAAACCAATGGAATGGCCTTGCGGGGCGATGGCTCTGAACAACTTACAAATGGATTATCTACTGATCCGTCCCTTGTGTCATTTACTTCCATCCCATCCAATTCAATAGGAAACATTCTTGAACAAGAAAATACTGTTCCGGGTGACCTTTTAGGCATAAAAAATGTCCTCATCGGGTCAGCTGGGAGTTCTCAGACCCTCCAATCAGATTGGCAGATCCCTTTTGAAAGTAATCCAGGGCAGATGTCGAAAGAGCTTACAACCCAATCGCTGGGTTTGGAGTTTGGCTCTGACTTTAGCAATGGTTTGCTGCAACATGAAACACATGACCATGTTGCTTCTGGCTCTCTAAATTTTAACTGTCAGCAAAAAGAGGAGCCTGTGCCGGAAAACTTTCCAGAACAGCATACTGATACTCAATCTCAAATTTTGCTGAAATACAATTTTGGGAATGAAGGTCCCACAGAAGAAAGTATTAATTATGCCTTGACTGTGACGCGGCGGTCCTTATTAGATGGGGAGGAAAGCCTAAAGAAAGTTGACAGCTTCTCTCGATGGATTACTAAAGAACTTGAAGAGGTGGATGATCTCCATATGCAGTCATCACCTGGCATTTCTTGGAGCGCTGATGAATGTGGGCATGTGATAGATGATTCCTCATTGAGCCCCTCCCTCTCTCAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCTTATGCTGAATCGGAAACAGAGGTTTTGATCATTGGAACATTTTTGAAGAGTCAAACAGAGGTAGCGAACTGTAACTGGTCGTGCATGTTTGGGGAAGTTGAGGTTCCTGCCGAGGTTCTTGCCAGTGGAATTTTGTGCTGTCAAGCTCCATCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGCAGTGAAGTGCGGGAATTTGATTACACAGAGAGCTTGGCTGAAAATGTTGATGTTTCAGATTTCTACGACAGTTCAACTGAGATACGGTTTCATCTGAGACTAGAGAAGCTGCTTTCTTCAAAATCAGCGCTCCCTTCAAATTACAACTTTGACAATGATATGGTGAAAAGAAACTCTATATTTAAGCTCATTGCGTTAAAGGAGGAAGAGGCTTCCTCAGACAGGGAAGAGCTGATGTCAGAGAAGAATGCGTCCCAGCAAAAGGTGAAGGAGTTAATATTTTACGGGCAACTTAAAGAGAAGCTGTACTCTTGGCTGCTTCGCAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTGGATGAAGAGGGGCAAGGTGTGCTTCATTTAGCAGCTGCTCTTCGGCATGACTGGGCAATAATGCCAATCGTTACGGCAGGATTGAATATCAATTTCCGGGACGTGAATGGATGGACAGCTCTGCACTGGGCTGCATCGTATGGCAGGGAACGGACAGTTGCTGTACTTGTCTCCCTGGGTGCAGATGCTGGAGCATTGACAGATCCATCCCCAACGTTTCCCTCTGGAAGAACAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCAGAGTCTTCATTAACCAGCCACCTTTCAACCCTCACAATGAATGATCAGAAGGGAGATGTTGGGCAAAGAGCTTCAGAAGTAGAAGAAGTACAGACAATTTCAAAACGAACAGCAACACCGGGGTTTAACGGTGATATGCCAGATACCCTCTCCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACGCAAGCGGCTGATCGTATATACCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACCCAGTTTGAAGATGATGAGTTTGGACTGTCAGATCAGCAGGCTCTTTCCCTTATAGCTTCTAAGGCATGCAAGGCTGGATTTGGAGATGATTTAGCCCATACTGCTGCTGTGCAGATACAAAAGAAGTTTCGTGGTTGGAAGAAAAGAAAGGAATTTCTAGTAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTAAGAGGCCACCAGGTAAGGAAGCAGAATAAATCAGTCCTCTGGTCTGTGGGAATTTTGGAGAAGGTAATATTGCGGTGGAGACGCAAGGGCAGTGGTCTACGTGGCTTTCGACCTGATGCCAATAAAATCCCCAACCAAGAAAATGATACTGTGAAAGAGGATGATTACGATGTTCTCAAGGAAGGAAGGAAACAAAGTGAAGAAAGGTTCCAAAAGGCACTTACGAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGTTTGCTAAATGTTGTCGAGGACTTCCGGCGAACCAAGGCATGCGATATGGACGTGATCAATTCAGAAGAGACGGTCGATGGTGTAGAGGACCTTATTGATATTAACATGCTCTTGGATGATGAAAATTTCATACCTATAGCATTTGATTGA 2607 0.4453 MSPTSTLTSLCEDADSGDRAQTLISGADYLLQVQQDRPGGSDASTSFIDGRKTNGMALRGDGSEQLTNGLSTDPSLVSFTSIPSNSIGNILEQENTVPGDLLGIKNVLIGSAGSSQTLQSDWQIPFESNPGQMSKELTTQSLGLEFGSDFSNGLLQHETHDHVASGSLNFNCQQKEEPVPENFPEQHTDTQSQILLKYNFGNEGPTEESINYALTVTRRSLLDGEESLKKVDSFSRWITKELEEVDDLHMQSSPGISWSADECGHVIDDSSLSPSLSQDQLFSINDFSPNWAYAESETEVLIIGTFLKSQTEVANCNWSCMFGEVEVPAEVLASGILCCQAPSLKVGRVPFYVTCSNRLACSEVREFDYTESLAENVDVSDFYDSSTEIRFHLRLEKLLSSKSALPSNYNFDNDMVKRNSIFKLIALKEEEASSDREELMSEKNASQQKVKELIFYGQLKEKLYSWLLRKVIEDGKGPNVLDEEGQGVLHLAAALRHDWAIMPIVTAGLNINFRDVNGWTALHWAASYGRERTVAVLVSLGADAGALTDPSPTFPSGRTAADLASSNGHKGISGFLAESSLTSHLSTLTMNDQKGDVGQRASEVEEVQTISKRTATPGFNGDMPDTLSLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQFEDDEFGLSDQQALSLIASKACKAGFGDDLAHTAAVQIQKKFRGWKKRKEFLVIRQRIVKIQAHVRGHQVRKQNKSVLWSVGILEKVILRWRRKGSGLRGFRPDANKIPNQENDTVKEDDYDVLKEGRKQSEERFQKALTRVKSMVQYPEARAQYRRLLNVVEDFRRTKACDMDVINSEETVDGVEDLIDINMLLDDENFIPIAFD 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00030 868 SUPERFAMILY Ankyrin repeat 468 578 IPR036770 -
Pral3381g00030 868 Gene3D - 691 739 - -
Pral3381g00030 868 SMART ANK_2a 517 546 IPR002110 GO:0005515
Pral3381g00030 868 SMART ANK_2a 556 585 IPR002110 GO:0005515
Pral3381g00030 868 ProSiteProfiles IQ motif profile. 693 722 IPR000048 GO:0005515
Pral3381g00030 868 ProSiteProfiles Ankyrin repeat profile. 517 549 IPR002110 GO:0005515
Pral3381g00030 868 Gene3D Immunoglobulins 277 373 IPR013783 -
Pral3381g00030 868 ProSiteProfiles IQ motif profile. 716 740 IPR000048 GO:0005515
Pral3381g00030 868 SMART iq_5 715 737 IPR000048 GO:0005515
Pral3381g00030 868 SMART iq_5 692 714 IPR000048 GO:0005515
Pral3381g00030 868 ProSiteProfiles Ankyrin repeat region circular profile. 517 543 - -
Pral3381g00030 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 690 742 IPR027417 -
Pral3381g00030 868 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 96 830 - -
Pral3381g00030 868 Pfam Ankyrin repeats (3 copies) 466 544 IPR002110 GO:0005515
Pral3381g00030 868 Pfam IQ calmodulin-binding motif 695 713 IPR000048 GO:0005515
Pral3381g00030 868 Pfam IQ calmodulin-binding motif 718 735 IPR000048 GO:0005515
Pral3381g00030 868 FunFam Calmodulin-binding transcription activator 2 277 373 - -
Pral3381g00030 868 Coils Coil 429 449 - -
Pral3381g00030 868 Gene3D - 436 642 IPR036770 -
Pral3381g00030 868 SUPERFAMILY E set domains 284 369 IPR014756 -
Pral3381g00030 868 Pfam IPT/TIG domain 284 362 IPR002909 -
Pral3381g00030 868 FunFam Calmodulin-binding transcription activator 2 692 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00030 Pral-Chr3381 176638 184200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00030 4 849 CAMTA Transcription Factor Family AT5G64220 49.545 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00030 K21596 - gmx:100818124 1156.74