Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00029 ATGGCGGAGCGTGATTCTTACGGGCTGGGTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGTTGGTTGCGGCCTGCTGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCATATCACATCAGAACCTCCAAACATGCCACCAAGTGGTTCGCTTTTTCTTTTTGATAGGAAGGTATTGAGGTATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTATTACATTGCTACTATGCTCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGCTGCTTGAACAGGATATGATGCACATTGTTTTCGTACACTACTTGGAAGTTAAGGGTCATAAGACAAGTGTTGGAGGAAAACCAGATATTGATGAGGTTTCATCAGATTCCCAAAGAGGCAGCTCTGCATCATCTGGTTTTTCGAGAACTTATAATAACGTGCCGTCAAGAAGTACAGATTCCATGAGCCCAACTAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCGTGCACAGACATTGATTTCTGGAGCAGACTATCTTTTACAAGTTCAGCAAGATAGACCTGGAGGCAGTGATGCTAGTACTTCTTTCATTGATGGCCGAAAAACCAATGGAATGGCCTTGCGGGGCGATGGCTCTGAACAACTTACAAATGGATTATCTACTGATCCGTCCCTTGTGTCATTTACTTCCATCCCATCCAATTCAATAGGAAACATTCTTGAACAAGAAAATACTGTTCCGGGTGACCTTTTAGGCATAAAAAATGTCCTCATCGGGTCAGCTGGGAGTTCTCAGACCCTCCAATCAGATTGGCAGATCCCTTTTGAAAGTAATCCAGGGCAGATGTCGAAAGAGCTTACAACCCAATCGCTGGGTTTGGAGTTTGGCTCTGACTTTAGCAATGGTTTGCTGCAACATGAAACACATGACCATGTTGCTTCTGGCTCTCTAAATTTTAACTGTCAGCAAAAAGAGGAGCCTGTGCCGGAAAACTTTCCAGAACAGCATACTGATACTCAATCTCAAATTTTGCTGAAATACAATTTTGGGAATGAAGGTCCCACAGAAGAAAGTATTAATTATGCCTTGACTGTGACGCGGCGGTCCTTATTAGATGGGGAGGAAAGCCTAAAGAAAGTTGACAGCTTCTCTCGATGGATTACTAAAGAACTTGAAGAGGTGGATGATCTCCATATGCAGTCATCACCTGGCATTTCTTGGAGCGCTGATGAATGTGGGCATGTGATAGATGATTCCTCATTGAGCCCCTCCCTCTCTCAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCTTATGCTGAATCGGAAACAGAGGTTTTGATCATTGGAACATTTTTGAAGAGTCAAACAGAGGTAGCGAACTGTAACTGGTCGTGCATGTTTGGGGAAGTTGAGGTTCCTGCCGAGGTTCTTGCCAGTGGAATTTTGTGCTGTCAAGCTCCATCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGCAGTGAAGTGCGGGAATTTGATTACACAGAGAGCTTGGCTGAAAATGTTGATGTTTCAGATTTCTACGACAGTTCAACTGAGATACGGTTTCATCTGAGACTAGAGAAGCTGCTTTCTTCAAAATCAGCGCTCCCTTCAAATTACAACTTTGACAATGATATGGTGAAAAGAAACTCTATATTTAAGCTCATTGCGTTAAAGGAGGAAGAGGCTTCCTCAGACAGGGAAGAGCTGATGTCAGAGAAGAATGCGTCCCAGCAAAAGGTGAAGGAGTTAATATTTTACGGGCAACTTAAAGAGAAGCTGTACTCTTGGCTGCTTCGCAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTGGATGAAGAGGGGCAAGGTGTGCTTCATTTAGCAGCTGCTCTTCGGCATGACTGGGCAATAATGCCAATCGTTACGGCAGGATTGAATATCAATTTCCGGGACGTGAATGGATGGACAGCTCTGCACTGGGCTGCATCGTATGGCAGGGAACGGACAGTTGCTGTACTTGTCTCCCTGGGTGCAGATGCTGGAGCATTGACAGATCCATCCCCAACGTTTCCCTCTGGAAGAACAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCAGAGTCTTCATTAACCAGCCACCTTTCAACCCTCACAATGAATGATCAGAAGGGAGATGTTGGGCAAAGAGCTTCAGAAGTAGAAGAAGTACAGACAATTTCAAAACGAACAGCAACACCGGGGTTTAACGGTGATATGCCAGATACCCTCTCCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACGCAAGCGGCTGATCGTATATACCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACCCAGTTTGAAGATGATGAGTTTGGACTGTCAGATCAGCAGGCTCTTTCCCTTATAGCTTCTAAGGCATGCAAGGCTGGATTTGGAGATGATTTAGCCCATACTGCTGCTGTGCAGATACAAAAGAAGTTTCGTGGTTGGAAGAAAAGAAAGGAATTTCTAGTAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTAAGAGGCCACCAGGTAAGGAAGCAGAATAAATCAGTCCTCTGGTCTGTGGGAATTTTGGAGAAGGTAATATTGCGGTGGAGACGCAAGGGCAGTGGTCTACGTGGCTTTCGACCTGATGCCAATAAAATCCCCAACCAAGAAAATGATACTGTGAAAGAGGATGATTACGATGTTCTCAAGGAAGGAAGGAAACAAAGTGAAGAAAGGTTCCAAAAGGCACTTACGAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGTTTGCTAAATGTTGTCGAGGACTTCCGGCGAACCAAGGCATGCGATATGGACGTGATCAATTCAGAAGAGACGGTCGATGGTGTAGAGGACCTTATTGATATTAACATGCTCTTGGATGATGAAAATTTCATACCTATAGCATTTGATTGA 3144 0.4389 MAERDSYGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKGHKTSVGGKPDIDEVSSDSQRGSSASSGFSRTYNNVPSRSTDSMSPTSTLTSLCEDADSGDRAQTLISGADYLLQVQQDRPGGSDASTSFIDGRKTNGMALRGDGSEQLTNGLSTDPSLVSFTSIPSNSIGNILEQENTVPGDLLGIKNVLIGSAGSSQTLQSDWQIPFESNPGQMSKELTTQSLGLEFGSDFSNGLLQHETHDHVASGSLNFNCQQKEEPVPENFPEQHTDTQSQILLKYNFGNEGPTEESINYALTVTRRSLLDGEESLKKVDSFSRWITKELEEVDDLHMQSSPGISWSADECGHVIDDSSLSPSLSQDQLFSINDFSPNWAYAESETEVLIIGTFLKSQTEVANCNWSCMFGEVEVPAEVLASGILCCQAPSLKVGRVPFYVTCSNRLACSEVREFDYTESLAENVDVSDFYDSSTEIRFHLRLEKLLSSKSALPSNYNFDNDMVKRNSIFKLIALKEEEASSDREELMSEKNASQQKVKELIFYGQLKEKLYSWLLRKVIEDGKGPNVLDEEGQGVLHLAAALRHDWAIMPIVTAGLNINFRDVNGWTALHWAASYGRERTVAVLVSLGADAGALTDPSPTFPSGRTAADLASSNGHKGISGFLAESSLTSHLSTLTMNDQKGDVGQRASEVEEVQTISKRTATPGFNGDMPDTLSLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQFEDDEFGLSDQQALSLIASKACKAGFGDDLAHTAAVQIQKKFRGWKKRKEFLVIRQRIVKIQAHVRGHQVRKQNKSVLWSVGILEKVILRWRRKGSGLRGFRPDANKIPNQENDTVKEDDYDVLKEGRKQSEERFQKALTRVKSMVQYPEARAQYRRLLNVVEDFRRTKACDMDVINSEETVDGVEDLIDINMLLDDENFIPIAFD 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00029 1047 Gene3D Immunoglobulins 456 552 IPR013783 -
Pral3381g00029 1047 SMART iq_5 894 916 IPR000048 GO:0005515
Pral3381g00029 1047 SMART iq_5 871 893 IPR000048 GO:0005515
Pral3381g00029 1047 MobiDBLite consensus disorder prediction 153 191 - -
Pral3381g00029 1047 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Pral3381g00029 1047 Pfam IQ calmodulin-binding motif 874 892 IPR000048 GO:0005515
Pral3381g00029 1047 Pfam IQ calmodulin-binding motif 897 914 IPR000048 GO:0005515
Pral3381g00029 1047 Gene3D - 617 820 IPR036770 -
Pral3381g00029 1047 Pfam IPT/TIG domain 463 541 IPR002909 -
Pral3381g00029 1047 SMART ANK_2a 696 725 IPR002110 GO:0005515
Pral3381g00029 1047 SMART ANK_2a 735 764 IPR002110 GO:0005515
Pral3381g00029 1047 Pfam Ankyrin repeats (3 copies) 645 723 IPR002110 GO:0005515
Pral3381g00029 1047 Coils Coil 608 628 - -
Pral3381g00029 1047 FunFam Calmodulin-binding transcription activator 2 456 552 - -
Pral3381g00029 1047 ProSiteProfiles IQ motif profile. 872 901 IPR000048 GO:0005515
Pral3381g00029 1047 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1009 - -
Pral3381g00029 1047 MobiDBLite consensus disorder prediction 141 192 - -
Pral3381g00029 1047 SMART CG_1_2 18 136 IPR005559 GO:0003677
Pral3381g00029 1047 ProSiteProfiles Ankyrin repeat region circular profile. 696 722 - -
Pral3381g00029 1047 Gene3D - 870 918 - -
Pral3381g00029 1047 FunFam Calmodulin-binding transcription activator 2 871 919 - -
Pral3381g00029 1047 ProSiteProfiles Ankyrin repeat profile. 696 728 IPR002110 GO:0005515
Pral3381g00029 1047 SUPERFAMILY Ankyrin repeat 646 757 IPR036770 -
Pral3381g00029 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 869 921 IPR027417 -
Pral3381g00029 1047 SUPERFAMILY E set domains 463 548 IPR014756 -
Pral3381g00029 1047 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Pral3381g00029 1047 ProSiteProfiles IQ motif profile. 895 919 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00029 Pral-Chr3381 176638 187392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3381g00029 1 1028 CAMTA Transcription Factor Family AT5G64220 53.296 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pral3381g00029 CG-1 1.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00029 K21596 - gmx:100795682 1437.17