Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3381g00021 ATGGCCACAGTCGCCACCACCGCTACATCGTCAGCTCCGCCGCCACAAGCCCTAAAATTGGAGTCCCTTCCTCGAATAGACACCACCACCCTTTCCCAGTCTGAGCTCCATGCGCTCTCTCTCTGCTCACTCTCCGCCTTCGACCTCCGTTCTACCAGCAACCTCGTTTTCCCCAATGTCGACCGTTCACTCTTCAATGAGAGCGCCGGGTCTCGCCGCCAGACCTACTCCCGACCACGCAAACCCCTTTCCCCTTCCGACTCCCCCACCGGCCACCGTCGACGCGTCGCTGGTCTTCTTCCAACCCCAAAGCTCCCGCCTGTCCCCGATGACGACCCGGAAAACCTAGAGAAACGCAAGATTATAGATTATTTGAAGCAAATGATAAGGGAAGACCCTAAATTCGATCAAGTTGAGCTGGCCCCGCCTTCTGTTACCCACGAAGTTGTGCCGAATCCTGAGTTAAGGGTCGGGATGGTGGAGAGCGAGGATATGGGGCTCGTGAGGAAAAGGAAGAGGGGGAGGAAGCCCAAAGTGAAGGTGCATTTGAAGGAGTGCTATAGAGAGATGGATATTGTGAATAAGGGTGGTGTCGCGATTGATCTTTCTGCTTTGGCGAATACGGAGGATCCATTTTCTGAGGAGTTGAGGAGAAGGACTGAGGGGTTGCAGAGTGAAGAAGAGCTATTGGGGTTTTTGAGGGATTTAGGGGGACAATGGGGTAGTAGGAGGAAGAAGAGGAAGATTGTGGAAGCCGAAGACTTCGGTGATGTACTGCCGGTTGGTTGGAAGCTTCTACTGGGTTTGAAGAGAAAAGATGGTCGCGCGTGGATTTATTGCCGCAGATACATCAGTCCTAGCGGAGAACAATTTGTATCTTGCAAAGAAGTTTCTTCATATCTTCAGTCCCTTTTTGGTCACAATGATGCCCAGTTACCAATCAGCCGTAGAGGTGAAAATATGCTGATGGACCATGGGGTGACTACTAAAAGTTTTGCAGGTGTTACCCATGAGGAGCAGGATAAAAGGATGATCATTGCAAATGACTCAGCTCTACTCAGTTCTTCTGAATGTAATGAACGATTGAAAGAAGTGGCCTTAGTGGGAATTGAGAATCTTGCAGACGTGCAAATACATGACCTGTTTGAATGTCACAAATGTAGCATGACATTTGATGAGAAGGATTCATACTTGCAGCACCTTTTGTCTTTTCACCAAAGGACAACCAGGCGATATCGGCTTGGTTCTTCTGTTGGAGATGGAGTTATAATCAAAGATGGAAAATTTGAGTGCCAGTTCTGCCATAAGGTGTTTCTTGAAAGACGTCGCTACAATGGACATGTGGGGATCCATGTCAGGAACTATGTGAGGAAAGTTGAAGAGTCACCAGGTCAGGTAAATGTTCAAAGGAGAGATAAGTCTCCAATCAAGGAGGATTTGCCTTCAAGGATCTCTAAGATGGATGCGCTAATTGAAATTGCTCAGAACTCTATTATGGAGACTTCTGCAATCGAACCCCTTGGTAATCATGCTTCCTCTCCTGATAAACTGAATGGAATTACTACTACAGAAATTGCTGTTGGTAACTTAGATCATGACAAAATTGTTGAGTCTCCTCTCAGCGAACACCAAATGGAAGATAGCATCAATGACAAAAATGTGGATCGCAACTTGAATCACCAAGGTTGTAAACTTGCAGTCATGAATGAAGAAGTAGAGAAAACTGATGGTGATGACGAAGTTATAGATTCTAAGATGGAGACCTGTGAGGATCCCATTGGTTTGTCAACTGTAAATGAGCAAAATGTTGATGCACTTGAGAATTCAAAGACAAAAGATGATGTAGTGTTGACTTTTGATGGTTTGGATCAGTCGTGTGTTGATTTAGAAGGAGTTTCACAAAGCCCTCTACTTCCTTTATCTGGCAATGGTATAACCCATGAAGTTGAAAACAATCGAAATTCTGGTGGCACTATTACTGTGGAGCAACTTAACCACGATGTAGATGGTAGAAGTAAGAATGAGTTCAAAGTTGACTTAGATGGCACAAAAGACGTATCTGTTATGCCTAAAACCCAAGAGACAACATTGGCAACTTCTGAAGAGAATACAGTGTCATCTGAGGTTCCAACCCCATCTACGTCCGTGATACAATCTTTGGATTGCTTATCCCATCTCACTGGACTCTCAGATAAGGGGGAAAACCAATATTGCAGTGTTGACCACGAACATGATGACGTGAATGGGTCCCAAGAATTGAGGTTTGATGAAACAGAAACTTCAAAGTGTGATTTTGCAAATAGTCAGCCTTCTCTTTCTCTGCCTCAGGTGCCAACGGTTTTGGCAAACAGCACACCGATGGAAGAAGGGGCTTGTGCTTCCCCAGTACAGGTTGAATCTCAAGAAACAGGAAGACCTCAGATTACAACATCGTGCGTATGGTGTGGTATAGAGTTTGGTTATGATGCTGTTGATTCTGAAATACAGCCAGATTCTGTTGGATTCATGTGCCTGGCTTGTAAGGCCAAAATATCTGGTCAAATCGATGTGTTGGACCGTAGATCACCCTTGAACTCTGACCATATTTGA 2589 0.4542 MATVATTATSSAPPPQALKLESLPRIDTTTLSQSELHALSLCSLSAFDLRSTSNLVFPNVDRSLFNESAGSRRQTYSRPRKPLSPSDSPTGHRRRVAGLLPTPKLPPVPDDDPENLEKRKIIDYLKQMIREDPKFDQVELAPPSVTHEVVPNPELRVGMVESEDMGLVRKRKRGRKPKVKVHLKECYREMDIVNKGGVAIDLSALANTEDPFSEELRRRTEGLQSEEELLGFLRDLGGQWGSRRKKRKIVEAEDFGDVLPVGWKLLLGLKRKDGRAWIYCRRYISPSGEQFVSCKEVSSYLQSLFGHNDAQLPISRRGENMLMDHGVTTKSFAGVTHEEQDKRMIIANDSALLSSSECNERLKEVALVGIENLADVQIHDLFECHKCSMTFDEKDSYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEESPGQVNVQRRDKSPIKEDLPSRISKMDALIEIAQNSIMETSAIEPLGNHASSPDKLNGITTTEIAVGNLDHDKIVESPLSEHQMEDSINDKNVDRNLNHQGCKLAVMNEEVEKTDGDDEVIDSKMETCEDPIGLSTVNEQNVDALENSKTKDDVVLTFDGLDQSCVDLEGVSQSPLLPLSGNGITHEVENNRNSGGTITVEQLNHDVDGRSKNEFKVDLDGTKDVSVMPKTQETTLATSEENTVSSEVPTPSTSVIQSLDCLSHLTGLSDKGENQYCSVDHEHDDVNGSQELRFDETETSKCDFANSQPSLSLPQVPTVLANSTPMEEGACASPVQVESQETGRPQITTSCVWCGIEFGYDAVDSEIQPDSVGFMCLACKAKISGQIDVLDRRSPLNSDHI 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3381g00021 862 ProSiteProfiles Zinc finger C2H2 type domain profile. 382 410 IPR013087 -
Pral3381g00021 862 Gene3D Classic Zinc Finger 358 457 - -
Pral3381g00021 862 ProSitePatterns Zinc finger C2H2 type domain signature. 431 451 IPR013087 -
Pral3381g00021 862 ProSitePatterns Zinc finger C2H2 type domain signature. 384 405 IPR013087 -
Pral3381g00021 862 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 249 321 IPR001739 GO:0003677
Pral3381g00021 862 ProSiteProfiles Zinc finger C2H2 type domain profile. 429 456 IPR013087 -
Pral3381g00021 862 SUPERFAMILY DNA-binding domain 252 304 IPR016177 GO:0003677
Pral3381g00021 862 MobiDBLite consensus disorder prediction 68 84 - -
Pral3381g00021 862 MobiDBLite consensus disorder prediction 68 115 - -
Pral3381g00021 862 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 632 IPR037472 -
Pral3381g00021 862 SMART c2h2final6 429 451 IPR013087 -
Pral3381g00021 862 SMART c2h2final6 382 405 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3381g00021 Pral-Chr3381 138067 142659 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral3381g00021 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3381g00021 - - qsa:O6P43_012364 957.977