Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3380g00004 ATGTTATATGGTTATATACCCAACGATATAGGCAATCTTGTTAGACTTGAAATCTTAGCTTTGGGAGGAAACAATCTGTATGGACCCATTCCTTCCAATATATTTAACATTTCAACATTGAAAAGAGTGCTCCTTGATTGGAATTTCCTCTATGGCCTTTTGCCATCATATTTAGGAATTGGCCTTCCCAACCTGTATGAGTTACAGTTGCAAGGAAATGAACTAACTGGACAAATTCCAAATAGCATATCAAATGCTTCTAAGCTCATTAAGTTAGATTTGTCGTTGAATAAATTTAACGGAGCTATACCCACTACCCTCAAAAGTTTAACAAGCTTGATAGAATTAGATTTGGATGAGAATCATTTGACAGGGTTGATTCCAGACATATTTAACCAATTACATAACCTTCAACGTTTAAGTCTAAGTAACAACAAATTGCACGGGTTCATTATAACTGAACTTTGTCAACTCAAAGGTCTGAGTGAGTTGTATCTTGCCAAGAACATGTTTTCAGGAGCAATTCCAGGATGTCTCAGAAATACTTCTTTGCGGAAGTTAAATTTTAGCTCTAACAAATTGATATCTCATATACCCTCTTCTCTTTGGAGTCTCAAAGATATCTTGGTATTAGACATATCCTCTAATGCACTAAGTGGAATGATTTCACCAGAGGTATCAAACTTCAGAGCAATTATACTATTGAACTTGTCCAGAAACCAAATTTCAGGAAGCATCCCTGCAGCTATAGGCAGCTTGCAAACTTTACAGACTTTATCTTTAGCTCAAAACAAATTGCAAGGGCCTATTCCTGAAGCGTTTAGTGGCATGATAAGCATGGAGTCTATGGATCTTTCTCATAATTACTTATCTGGGGTGATTCCAAAGTCCTTGGAGTCATTACTCTATCTTAACTACATGAATCTTTCCTACAATTTATTGCATGGAGAAATTCCTGATGGTGGCCCTTTTTGGAATTTTACTGCCCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTTCAACCATGTAGGAGAGGAAACAAGCCCATATCAAATAAAGTGATGCTAATGATAAAATGCTTATTACCCATCATGTTTGTCATTTTGGTTGTTTCAAGCATTATCTTTCTAAAGCATAAGAGAGATGATGATAATTATTCAACCAAAAAGGATTTAACAGATTTGGATACACCAACTAGGATATCCTATTATGAACTTCTACAAGGAACAAATGGATTTGATGAGAGTAATCTTCTAGGCTCTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTCCTAATGAAAATATAGTTGCTGTCAAAGTATTTAATAACTTAGACACAGAAGAAGCATTGAGAAGTTTTGATATTGAATGTGCTGCCATATGCAATTTGCGCCATCGCAATCTCATTAAAACCATTAGCAGTTGCTCAAACGATCATTTCAGATCTCTAATCATGGAATTCATGGCAAATGGGAGTCTCGACAAATGGTTGTACTCTCATAACTATTATTTAAATGTCTTGCAAAGGCTGAATATAATGATAGATGTGGCAACAGCTTTGGAGTATCTTCATCATGGTTCTCCTATACTAGTTGTTCACTGTGATGTGAAACCAAGCAATATTTTGTTAGACGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAAATTATTTGGTGAAAAGCAATCAAAAATTTATACGAAATCTTTGGCTACTATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTTGTCTCTGCCAAAGGAGATGTGTATAGTTATGGTATTTTGCTGATGGAAATGTTTACAAGGAAGAAGCCAACAGATGAGATATTTGTTCAAGGACTAAATTTGAAAGACTGGGTGAGCAAATCCACACCACATTCAATCATCAATATTATAGATGCAAATTTGTTGCATAGAAAAAATCAAAATACTGATAATATATTATCTCATATATCATCAGTTTTTGATCTAGCATTAAAGTGTTGCAATGACTTACCTGAAGTACGACTTACTATGATTGATGTTGTAGTGTCATTGAAAAAGATCAAGGTTTTGTTAATGGAAAATGCTCAGCAAATTGTTAGTTGA 2127 0.3484 MLYGYIPNDIGNLVRLEILALGGNNLYGPIPSNIFNISTLKRVLLDWNFLYGLLPSYLGIGLPNLYELQLQGNELTGQIPNSISNASKLIKLDLSLNKFNGAIPTTLKSLTSLIELDLDENHLTGLIPDIFNQLHNLQRLSLSNNKLHGFIITELCQLKGLSELYLAKNMFSGAIPGCLRNTSLRKLNFSSNKLISHIPSSLWSLKDILVLDISSNALSGMISPEVSNFRAIILLNLSRNQISGSIPAAIGSLQTLQTLSLAQNKLQGPIPEAFSGMISMESMDLSHNYLSGVIPKSLESLLYLNYMNLSYNLLHGEIPDGGPFWNFTAQSFMMNKDLCGKSQLQVQPCRRGNKPISNKVMLMIKCLLPIMFVILVVSSIIFLKHKRDDDNYSTKKDLTDLDTPTRISYYELLQGTNGFDESNLLGSGSFGSVYKAILPNENIVAVKVFNNLDTEEALRSFDIECAAICNLRHRNLIKTISSCSNDHFRSLIMEFMANGSLDKWLYSHNYYLNVLQRLNIMIDVATALEYLHHGSPILVVHCDVKPSNILLDEDMVAHLSDFGIAKLFGEKQSKIYTKSLATIGYMAPEYGSKGVVSAKGDVYSYGILLMEMFTRKKPTDEIFVQGLNLKDWVSKSTPHSIINIIDANLLHRKNQNTDNILSHISSVFDLALKCCNDLPEVRLTMIDVVVSLKKIKVLLMENAQQIVS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3380g00004 708 ProSiteProfiles Protein kinase domain profile. 419 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3380g00004 708 Pfam Leucine rich repeat 255 314 IPR001611 GO:0005515
Pral3380g00004 708 Pfam Leucine rich repeat 112 170 IPR001611 GO:0005515
Pral3380g00004 708 PANTHER OS04G0122200 PROTEIN 101 697 - -
Pral3380g00004 708 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 496 705 - -
Pral3380g00004 708 SUPERFAMILY L domain-like 6 328 - -
Pral3380g00004 708 SMART LRR_typ_2 277 300 IPR003591 -
Pral3380g00004 708 SMART LRR_typ_2 110 133 IPR003591 -
Pral3380g00004 708 SMART LRR_typ_2 134 158 IPR003591 -
Pral3380g00004 708 SMART LRR_typ_2 62 86 IPR003591 -
Pral3380g00004 708 SMART LRR_typ_2 253 276 IPR003591 -
Pral3380g00004 708 SMART LRR_typ_2 13 37 IPR003591 -
Pral3380g00004 708 SMART LRR_typ_2 182 205 IPR003591 -
Pral3380g00004 708 Gene3D Transferase(Phosphotransferase) domain 1 496 706 - -
Pral3380g00004 708 Gene3D Phosphorylase Kinase; domain 1 381 495 - -
Pral3380g00004 708 SUPERFAMILY Protein kinase-like (PK-like) 399 700 IPR011009 -
Pral3380g00004 708 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
Pral3380g00004 708 Gene3D Ribonuclease Inhibitor 1 350 IPR032675 -
Pral3380g00004 708 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 97 353 - -
Pral3380g00004 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Pral3380g00004 708 SMART serkin_6 419 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3380g00004 708 Pfam Protein kinase domain 420 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3380g00004 Pral-Chr3380 261564 263989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3380g00004 2 696 Receptor kinase-like Gene Family AT3G47570 35.910 8.66e-141 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3380g00004 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3380g00004 - K13420 pcin:129285519 996.882